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cn_combo_scaffold_23_77

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(96048..96521)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus biogenesis protein PilE n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU87_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 144.0
  • Bit_score: 153
  • Evalue 2.40e-34
Type IV pilus biogenesis protein PilE {ECO:0000313|EMBL:EGJ11905.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilytic similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 144.0
  • Bit_score: 153
  • Evalue 3.40e-34
pilE; fimbrial protein, type IV pilin, PilE similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 143.0
  • Bit_score: 146
  • Evalue 4.90e-33

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Taxonomy

Rubrivivax benzoatilyticus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGCCTGTTTGCCGCCCCCGTTCCAGCCTCGAGCGTGGCCTGCATCGCGCCGCGATGCGCGGCTTCACGCTCATCGAGCTGATGATCGTGATCGCCATCGTCGCCATCCTGGCGTCGGTCGCGCTGCCGGCCTACACCGCCTACCTGCAGCGCGCCAAGGTGCCCGCGGGGCTGGACGCGCTGCAGTCCTACTTCACGCGCATGGAGCAGCGCTTCCAGGACAGCGGCAGCTACGCCGTGAGCAGCGGCGGCGGTGACGCCTGCGCCGTGGCCGTGCCCAGCGGTGTGCAGAACTACACCGTCAGCTGCGCCATCACGGCTGCCGGCTACACCGCCACGGCCACCGGCACCGGTCCGCTGGCGGGCTACGCCTACACCATCAACTCGGCCGGCACGAGGGCCACCACCGCGCATCCCAAGGGTGCGCCGGCGGGCAGCTGCTGGAGCATCAGGGGGGTCTCGTGCGACGCCTGA
PROTEIN sequence
Length: 158
MPVCRPRSSLERGLHRAAMRGFTLIELMIVIAIVAILASVALPAYTAYLQRAKVPAGLDALQSYFTRMEQRFQDSGSYAVSSGGGDACAVAVPSGVQNYTVSCAITAAGYTATATGTGPLAGYAYTINSAGTRATTAHPKGAPAGSCWSIRGVSCDA*