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cn_combo_scaffold_32

Alias: RUB134_3

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Displaying items 91-120 of 220 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_32_91
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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92132..93622
DNA (1491bp) protein (497aa)
Ribulose bisphosphate carboxylase large chain {ECO:0000256|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000256|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01338};; TaxID=9
cbbL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit CbbL (EC:4.1.1.39)
Ribulose bisphosphate carboxylase large chain n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVL3_9BURK
Type IC. Rose Kantor (6/30/14)
cn_combo_scaffold_32_92
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93636..94124
DNA (489bp) protein (163aa)
cbbS; ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit CbbS (EC:4.1.1.39); K01602 ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_2
cbbS; ribulose 1,5-bisphosphate carboxylase small subunit (EC:4.1.1.39)
Ribulose-bisphosphate carboxylase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVL2_9BURK
Small subunit. Rose Kantor (6/30/14)
cn_combo_scaffold_32_93
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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94205..95167
DNA (963bp) protein (321aa)
AAA type ATPase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVL0_9BURK
AAA type ATPase {ECO:0000313|EMBL:EGJ12378.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;
cbbX; rubisco accessory protein CbbX, AAA ATPase
cn_combo_scaffold_32_94
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95214..96356
DNA (1143bp) protein (381aa)
cbbF2; fructose-1,6-bisphosphatase I (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 2 {ECO:0000255|HAMAP-Rule:MF_01855}; Short=FBPase class 1 2 {ECO:0000255|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000255|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisph
Fructose-1,6-bisphosphatase class 1 2 n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=F16A2_RALME
cn_combo_scaffold_32_95
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96373..97257
DNA (885bp) protein (295aa)
cbbP; phosphoribulokinase (EC:2.7.1.19)
Phosphoribulokinase {ECO:0000256|RuleBase:RU004082}; EC=2.7.1.19 {ECO:0000256|RuleBase:RU004082};; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae
Phosphoribulokinase n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LN81_RALME
cn_combo_scaffold_32_96
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97351..97920)
DNA (570bp) protein (190aa)
ptpA; putative protein-tyrosine phosphatase (EC:3.1.3.48)
Protein-tyrosine-phosphatase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LS47_9BURK
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:EGJ11165.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 =
cn_combo_scaffold_32_97
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97917..100049)
DNA (2133bp) protein (711aa)
UvrABC system protein B n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LS46_9BURK
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
uvrB; UvrABC system protein B
cn_combo_scaffold_32_98
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100189..101400
DNA (1212bp) protein (404aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase {ECO:0000313|EMBL:BAL94879.1}; EC=2.6.1.- {ECO:0000313|EMBL:BAL94879.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Ru
Aminotransferase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPE2_RUBGI
cn_combo_scaffold_32_99
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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101623..102909
DNA (1287bp) protein (429aa)
phaZ; putative polyhydroxyalkanoate depolymerase PhaZ (EC:3.1.1.-)
Putative polyhydroxyalkanoate depolymerase PhaZ {ECO:0000313|EMBL:BAL94878.1}; EC=3.1.1.- {ECO:0000313|EMBL:BAL94878.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholder
Putative polyhydroxyalkanoate depolymerase PhaZ n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPE1_RUBGI
cn_combo_scaffold_32_100
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102906..103622
DNA (717bp) protein (239aa)
Electron transport complex, RnfABCDGE type, B subunit RnfB n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPE0_RUBGI
rnfB; electron transport complex, RnfABCDGE type, B subunit RnfB
Electron transport complex, RnfABCDGE type, B subunit RnfB {ECO:0000313|EMBL:BAL94877.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rub
cn_combo_scaffold_32_101
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103619..104290
DNA (672bp) protein (224aa)
endonuclease III / DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.- 4.2.99.18)
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
Endonuclease III n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SI64_METPP
cn_combo_scaffold_32_102
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104287..104499
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKI8_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR72455.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
cn_combo_scaffold_32_103
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104496..104888
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPD7_RUBGI
hypothetical protein
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NB
cn_combo_scaffold_32_104
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105141..105341
DNA (201bp) protein (67aa)
Uncharacterized protein {ECO:0000313|EMBL:BAL94872.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 10
cn_combo_scaffold_32_105
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105342..106415)
DNA (1074bp) protein (358aa)
Diguanylate cyclase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPD4_RUBGI
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:BAL94871.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245
cn_combo_scaffold_32_106
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106516..106728
DNA (213bp) protein (71aa)
30S ribosomal protein S21 n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKL7_9BURK
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderial
rpsU; 30S ribosomal protein S21
cn_combo_scaffold_32_107
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106907..107353
DNA (447bp) protein (149aa)
GatB/YqeY domain-containing protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LS34_9BURK
GatB/YqeY domain-containing protein {ECO:0000313|EMBL:EGJ11152.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus
hypothetical protein
cn_combo_scaffold_32_108
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107366..107728
DNA (363bp) protein (121aa)
Putative hydrolase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPD0_RUBGI
putative hydrolase Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
putative hydrolase
cn_combo_scaffold_32_109
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107780..109153)
DNA (1374bp) protein (458aa)
peptidase C69 n=1 Tax=Caldimonas manganoxidans RepID=UPI000365D37B
tldE; protein TldE
Protein TldE {ECO:0000313|EMBL:BAL94863.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL14
cn_combo_scaffold_32_110
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109171..109797
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LS28_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11146.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC
hypothetical protein
cn_combo_scaffold_32_111
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109817..110422
DNA (606bp) protein (202aa)
Molybdopterin adenylyltransferase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJQ3_METPP
molybdopterin adenylyltransferase
Molybdopterin adenylyltransferase {ECO:0000313|EMBL:ABM95792.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum
cn_combo_scaffold_32_112
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110471..111250)
DNA (780bp) protein (260aa)
cysE; serine O-acetyltransferase CysE (EC:2.3.1.30)
Serine O-acetyltransferase CysE {ECO:0000313|EMBL:BAL94860.1}; EC=2.3.1.30 {ECO:0000313|EMBL:BAL94860.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubriviv
Serine acetyltransferase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPC3_RUBGI
cn_combo_scaffold_32_113
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111306..112136)
DNA (831bp) protein (277aa)
trmJ; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ (EC:2.1.1.-)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256
tRNA (Cytidine/uridine-2'-O-)-methyltransferase TrmJ n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPC2_RUBGI
cn_combo_scaffold_32_114
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112208..113047
DNA (840bp) protein (280aa)
suhB; myo-inositol-1(or 4)-monophosphatase SuhB (EC:3.1.3.25)
Myo-inositol-1(Or 4)-monophosphatase SuhB n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPC1_RUBGI
Inositol-1(Or 4)-monophosphatase {ECO:0000313|EMBL:EGJ11142.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA
cn_combo_scaffold_32_115
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113094..114449
DNA (1356bp) protein (452aa)
amidase (EC:6.3.5.-)
Amidase n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T728_ALCXX
Amidase {ECO:0000313|EMBL:KCB45911.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
cn_combo_scaffold_32_116
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(114467..115702)
DNA (1236bp) protein (412aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y583_LEPCP
L-carnitine dehydratase/bile acid-inducible protein F
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
cn_combo_scaffold_32_117
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115777..118407
DNA (2631bp) protein (877aa)
DNA mismatch repair protein MutS n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPC0_RUBGI
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" so
mutS; DNA mismatch repair protein MutS rbh
cn_combo_scaffold_32_118
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118404..120032)
DNA (1629bp) protein (543aa)
Response regulator receiver protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y788_LEPCP
response regulator receiver protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
response regulator receiver protein
cn_combo_scaffold_32_119
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120137..120970
DNA (834bp) protein (278aa)
alpha/beta hydrolase n=1 Tax=Ideonella sp. B508-1 RepID=UPI000344CF5F
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EHR72500.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholder
alpha/beta hydrolase
cn_combo_scaffold_32_120
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121025..121558)
DNA (534bp) protein (178aa)
msrA; peptide methionine sulfoxide reductase MsrA (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRU7_RUBGI
Displaying items 91-120 of 220 in total

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