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cn_combo_scaffold_64

Alias: RUB134_4

Search features with annotation key words

Displaying items 1-30 of 185 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_64_1
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..568
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W5N2_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM41557.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
cn_combo_scaffold_64_2
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(603..3593)
DNA (2991bp) protein (997aa)
Putative transcriptional regulator n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMR4_RUBGI
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAL94301.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (str
cn_combo_scaffold_64_3
unknown

Not on your lists

3788..4909
DNA (1122bp) protein (374aa)

This feature has no annotations

cn_combo_scaffold_64_4
unknown

Not on your lists

comp(4960..5409)
DNA (450bp) protein (150aa)

This feature has no annotations

cn_combo_scaffold_64_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5499..6233)
DNA (735bp) protein (245aa)
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EGJ10302.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EGJ10302.1};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPN4_9BURK
phbB; dehydrogenase with different specificities related to short-chain alcohol dehydrogenase
cn_combo_scaffold_64_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6336..8027)
DNA (1692bp) protein (564aa)
Poly(R)-hydroxyalkanoic acid synthase, class I n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WN46_9BURK
Poly(R)-hydroxyalkanoic acid synthase, class I {ECO:0000313|EMBL:EHR71086.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium J
poly(R)-hydroxyalkanoic acid synthase
cn_combo_scaffold_64_7
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8201..8476
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRS8_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL95715.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 10
cn_combo_scaffold_64_8
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8405..9196)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRS7_RUBGI
hypothetical protein
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 1
cn_combo_scaffold_64_9
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9186..9818)
DNA (633bp) protein (211aa)
maiA; putative maleylacetoacetate isomerase MaiA (EC:5.2.1.2); K01800 maleylacetoacetate isomerase [EC:5.2.1.2] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
maiA; putative maleylacetoacetate isomerase MaiA (EC:5.2.1.2)
Maleylacetoacetate isomerase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WN43_9BURK
cn_combo_scaffold_64_10
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9846..10538)
DNA (693bp) protein (231aa)
Putative fumarylacetoacetate (FAA) hydrolase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPM8_9BURK
Putative fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:EGJ10296.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoa
putative isomerase/hydrolase
cn_combo_scaffold_64_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10606..11220
DNA (615bp) protein (205aa)
NUDIX hydrolase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPM7_9BURK
NUDIX hydrolase {ECO:0000313|EMBL:EGJ10295.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;
putative hydrolase
cn_combo_scaffold_64_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11199..12863)
DNA (1665bp) protein (555aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPM6_9BURK
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EGJ10294.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilytic
putative sensory box GGDEF/EAL domain protein
cn_combo_scaffold_64_13
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12968..14848)
DNA (1881bp) protein (627aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source=
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoamide dehydrogenase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLS9_9BURK
cn_combo_scaffold_64_14
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14921..16303)
DNA (1383bp) protein (461aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteob
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase (EC:2.3.1.61)
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLS7_9BURK
cn_combo_scaffold_64_15
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16316..19021)
DNA (2706bp) protein (902aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; C
aceE; pyruvate dehydrogenase subunit e1 (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIU9_ACIET
cn_combo_scaffold_64_16
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19165..21729
DNA (2565bp) protein (855aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" sourc
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRR8_RUBGI
cn_combo_scaffold_64_17
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21726..22349
DNA (624bp) protein (208aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRR7_RUBGI
LuxR family two component transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
LuxR family two component transcriptional regulator
cn_combo_scaffold_64_18
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22451..23323
DNA (873bp) protein (291aa)
Bifunctional protein FolD n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWK1_RAMTT
folD; bifunctional methylenetetrahydrofolate dehydrogenase/Methenyltetrahydrofolate cyclohydrolase
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tat
cn_combo_scaffold_64_19
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23352..23969
DNA (618bp) protein (206aa)
Glutaredoxin-like protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRR4_RUBGI
glutaredoxin-like protein
Glutaredoxin-like protein {ECO:0000313|EMBL:BAL95701.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC
cn_combo_scaffold_64_20
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23959..25173)
DNA (1215bp) protein (405aa)
Major facilitator superfamily protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUV5_9BURK
Major facilitator superfamily protein {ECO:0000313|EMBL:EGJ12123.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilytic
major facilitator superfamily protein rbh
cn_combo_scaffold_64_21
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25166..26410)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUV4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ12122.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC
hypothetical protein
cn_combo_scaffold_64_22
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26476..27468)
DNA (993bp) protein (331aa)
Glyoxylate/hydroxypyruvate reductase B {ECO:0000313|EMBL:EWS59302.1}; EC=1.1.1.79 {ECO:0000313|EMBL:EWS59302.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
2-hydroxyacid dehydrogenase (EC:1.1.1.215)
Putative 2-hydroxyacid dehydrogenase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFY4_METPP
cn_combo_scaffold_64_23
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27497..28972)
DNA (1476bp) protein (492aa)
Na+/H+ antiporter NhaD-like permease n=1 Tax=Acidovorax sp. CF316 RepID=J1EDF3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KDB53554.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans D
hypothetical protein
cn_combo_scaffold_64_24
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29189..29743
DNA (555bp) protein (185aa)
Granule-associated protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRQ5_RUBGI
phaP; granule-associated protein
Granule-associated protein {ECO:0000313|EMBL:BAL95692.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC
cn_combo_scaffold_64_25
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29816..30679)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRQ1_RUBGI
hypothetical protein; K07001 NTE family protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
hypothetical protein
cn_combo_scaffold_64_26
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30823..32556
DNA (1734bp) protein (578aa)
cysI; sulfite reductase (NADPH) hemoprotein beta-component CysI (EC:1.8.1.2)
Sulfite reductase (NADPH) hemoprotein beta-component CysI {ECO:0000313|EMBL:BAL95687.1}; EC=1.8.1.2 {ECO:0000313|EMBL:BAL95687.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria;
Sulfite reductase (NADPH) hemoprotein beta-component CysI n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRQ0_RUBGI
cn_combo_scaffold_64_27
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32596..33846
DNA (1251bp) protein (417aa)
cysH; phosphoadenosine phosphosulfate reductase (EC:1.8.4.8)
Phosphoadenosine phosphosulfate reductase CysH {ECO:0000313|EMBL:BAL95685.1}; EC=1.8.4.8 {ECO:0000313|EMBL:BAL95685.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
Phosphoadenosine phosphosulfate reductase CysH n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRP8_RUBGI
cn_combo_scaffold_64_28
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33859..34662
DNA (804bp) protein (268aa)
cobA; uroporphyrin-III C-methyltransferase CobA (EC:2.1.1.107)
Uroporphyrin-III C-methyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLQ3_9BURK
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:EHR71045.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;
cn_combo_scaffold_64_29
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34766..35089
DNA (324bp) protein (108aa)
4Fe-4S ferredoxin, iron-sulfur binding FdxA n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRP6_RUBGI
fdxA; 4Fe-4S ferredoxin, iron-sulfur binding FdxA
4Fe-4S ferredoxin, iron-sulfur binding FdxA {ECO:0000313|EMBL:BAL95683.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatin
cn_combo_scaffold_64_30
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35117..36217
DNA (1101bp) protein (367aa)
thioredoxin reductase (EC:1.8.1.9)
Ferredoxin--NADP reductase {ECO:0000255|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000255|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000255|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000255|HAMA
Ferredoxin--NADP reductase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=FENR_METPP
Displaying items 1-30 of 185 in total

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