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cn_combo_scaffold_122

Alias: RUB134_7

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Displaying items 31-60 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_122_31
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31164..31559)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXX6_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL97863.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 10
cn_combo_scaffold_122_32
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31623..32072)
DNA (450bp) protein (150aa)
Guanyl-specific ribonuclease Sa n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WSD9_9BURK
Guanyl-specific ribonuclease Sa {ECO:0000313|EMBL:EHR73448.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacteri
guanine-specific ribonuclease N1 and T1
cn_combo_scaffold_122_33
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32215..34533)
DNA (2319bp) protein (773aa)
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase {ECO:0000313|EMBL:ACB36170.1}; EC=1.1.1.40 {ECO:0000313|EMBL:ACB36170.1};; EC=2.3.1.8 {ECO:0000313|EMBL:ACB36
malic enzyme (EC:1.1.1.40 2.3.1.8)
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7M2_LEPCP
cn_combo_scaffold_122_34
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34659..35609
DNA (951bp) protein (317aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
thiL; thiamine-monophosphate kinase ThiL (EC:2.7.4.16)
Thiamine-monophosphate kinase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WSD5_9BURK
cn_combo_scaffold_122_35
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35635..36198
DNA (564bp) protein (188aa)
phosphatidylglycerophosphatase (EC:3.1.3.27); K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Phosphatidylglycerophosphatase A-like protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WSD4_9BURK
pgp; phosphatidylglycerophosphatase
cn_combo_scaffold_122_36
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36198..36686
DNA (489bp) protein (163aa)
CinA domain-containing protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXW9_RUBGI
CinA domain-containing protein
CinA domain-containing protein {ECO:0000313|EMBL:BAL97856.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain
cn_combo_scaffold_122_37
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36713..38446)
DNA (1734bp) protein (578aa)
GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K5Q6_AZOSB
uncharacterized LOC100205972 Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
diguanylate cyclase
cn_combo_scaffold_122_38
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38556..39497
DNA (942bp) protein (314aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XYJ4_LEPCP
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:ACB36430.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Lept
cn_combo_scaffold_122_39
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39537..40634)
DNA (1098bp) protein (366aa)
holA; DNA polymerase III delta subunit HolA (EC:2.7.7.7)
DNA polymerase III delta subunit HolA {ECO:0000313|EMBL:BAL97854.1}; EC=2.7.7.7 {ECO:0000313|EMBL:BAL97854.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rub
DNA polymerase III delta subunit HolA n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXW7_RUBGI
cn_combo_scaffold_122_40
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40653..41177)
DNA (525bp) protein (175aa)
Rare lipoprotein B n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WSD0_9BURK
lipoprotein B; K03643 LPS-assembly lipoprotein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
lptE; putative LPS-assembly lipoprotein LptE
cn_combo_scaffold_122_41
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(41164..43821)
DNA (2658bp) protein (886aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=365046 species="Bacteria; Proteob
Leucine--tRNA ligase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y417_RAMTT
leuS; Leucyl-tRNA synthetase
cn_combo_scaffold_122_42
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43887..44696)
DNA (810bp) protein (270aa)
dapB; dihydrodipicolinate reductase DapB (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXW2_RUBGI
cn_combo_scaffold_122_43
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44713..45312)
DNA (600bp) protein (200aa)
Small protein A (TmRNA-binding) n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WSC3_9BURK
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkhol
SmpA/OmlA domain-containing protein
cn_combo_scaffold_122_44
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45451..45882
DNA (432bp) protein (144aa)
Ferric uptake regulation protein Fur n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXW0_RUBGI
fur; ferric uptake regulation protein Fur
Ferric uptake regulation protein Fur {ECO:0000313|EMBL:BAL97847.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (s
cn_combo_scaffold_122_45
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45911..46867)
DNA (957bp) protein (319aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SA
hprK; HPr kinase/phosphorylase HprK (EC:2.7.11.- 2.7.4.-)
HPr kinase/phosphorylase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLK8_9BURK
cn_combo_scaffold_122_46
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46884..47354)
DNA (471bp) protein (157aa)
ptsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN (EC:2.7.1.69)
PTS IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:BAL97845.1}; EC=2.7.1.69 {ECO:0000313|EMBL:BAL97845.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXV8_RUBGI
cn_combo_scaffold_122_47
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47571..47909)
DNA (339bp) protein (113aa)
Sigma-54 modulation protein YfiA n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXV7_RUBGI
yfiA; sigma-54 modulation protein YfiA
Sigma-54 modulation protein YfiA {ECO:0000313|EMBL:BAL97844.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strai
cn_combo_scaffold_122_48
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48292..50538)
DNA (2247bp) protein (749aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KMX0_9PROT
transporter Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
transporter
cn_combo_scaffold_122_49
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50621..51097)
DNA (477bp) protein (159aa)
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
cn_combo_scaffold_122_50
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51094..52068)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Oceanicola sp. S124 RepID=UPI0002559F3C
bcsP31; 31 kDa immunogenic protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
bcsP31; 31 kDa immunogenic protein
cn_combo_scaffold_122_51
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52200..53210
DNA (1011bp) protein (337aa)
Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TIM2_BURSG
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADN61931.1}; TaxID=640512 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
cn_combo_scaffold_122_52
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53276..54466
DNA (1191bp) protein (397aa)
Sarcosine oxidase beta subunit (EC:1.5.3.1)
Sarcosine oxidase beta subunit {ECO:0000313|EMBL:CCH08077.1}; EC=1.5.3.1 {ECO:0000313|EMBL:CCH08077.1};; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligen
Sarcosine oxidase beta subunit n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XXZ2_ALCXX
cn_combo_scaffold_122_53
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54660..55301
DNA (642bp) protein (214aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WMK5_9BURK
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:KDB54373.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natan
beta-lactamase domain-containing protein
cn_combo_scaffold_122_54
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55301..55966
DNA (666bp) protein (222aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XXN2_LEPCP
Crp/FNR family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACB36351.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii
cn_combo_scaffold_122_55
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56004..57320)
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00037A231B
dctM3; putative TRAP-type C4-dicarboxylate transport system large permease Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
dctM3; putative TRAP-type C4-dicarboxylate transport system large permease
cn_combo_scaffold_122_56
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(57340..57831)
DNA (492bp) protein (164aa)
dctQ3; putative TRAP-type C4-dicarboxylate transport system small permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative TRAP-type C4-dicarboxylate transport system, small permease component id=4192681 bin=GWF2_Methylomirabilis_70_14 species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dctQ3; putative TRAP-type C4-dicarboxylate transport system small permease
cn_combo_scaffold_122_57
Roseobacter sp. GAI101, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57843..58811)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031881DE
Trap dicarboxylate transporter-dctp subunit {ECO:0000313|EMBL:EEB86126.1}; TaxID=391589 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source
TRAP dicarboxylate transporter subunit DctP
cn_combo_scaffold_122_58
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59026..59952)
DNA (927bp) protein (309aa)
Peptidase family M48 n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WML0_9BURK
peptidase M48 Ste24p Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
peptidase M48 family protein
cn_combo_scaffold_122_59
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60026..61561)
DNA (1536bp) protein (512aa)
Major facilitator transporter n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPB6_9BURK
major facilitator transporter; K08218 MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
ampG; putative transporter AmpG
cn_combo_scaffold_122_60
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61593..62822)
DNA (1230bp) protein (410aa)
phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U0W3_ALIDB
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:GAO26800.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
Displaying items 31-60 of 152 in total

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