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cn_combo_scaffold_122

Alias: RUB134_7

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Displaying items 1-30 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_122_1
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

625..1500
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KAX9_AZOSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL95985.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).
cn_combo_scaffold_122_2
unknown

Not on your lists

comp(1476..1772)
DNA (297bp) protein (99aa)

This feature has no annotations

cn_combo_scaffold_122_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1926..2543)
DNA (618bp) protein (206aa)
Glutathione S transferase domain containing protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXZ1_RUBGI
glutathione S transferase domain containing protein
Glutathione S transferase domain containing protein {ECO:0000313|EMBL:BAL97878.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax
cn_combo_scaffold_122_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2635..3486)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HYD7_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL98024.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 10
cn_combo_scaffold_122_5
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3952..5607)
DNA (1656bp) protein (552aa)
betA; oxidoreductase, GMC family protein BetA (EC:1.1.99.1)
Choline dehydrogenase-like flavoprotein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WMN0_9BURK
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:EHR73791.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales
cn_combo_scaffold_122_6
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5933..6397
DNA (465bp) protein (155aa)
RNP-1 like RNA-binding protein, Glycine-rich n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HYE0_RUBGI
RNP-1 like RNA-binding protein, Glycine-rich
RNP-1 like RNA-binding protein, Glycine-rich {ECO:0000313|EMBL:BAL98027.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelati
cn_combo_scaffold_122_7
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6601..7299)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LP96_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10164.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC
hypothetical protein
cn_combo_scaffold_122_8
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7338..7913)
DNA (576bp) protein (192aa)
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=Ideonella sp. B508-1 RepID=UPI000348ACF6
3-deoxy-manno-octulosonate-8-phosphatase {ECO:0000313|EMBL:EGJ10163.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatily
cn_combo_scaffold_122_9
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7913..8902)
DNA (990bp) protein (330aa)
KpsF/GutQ family protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LP94_9BURK
KpsF/GutQ family protein {ECO:0000313|EMBL:EGJ10162.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC
KpsF/GutQ family protein
cn_combo_scaffold_122_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8957..10960
DNA (2004bp) protein (668aa)
Sodium/hydrogen exchanger family protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HYE5_RUBGI
sodium/hydrogen exchanger family protein
Sodium/hydrogen exchanger family protein {ECO:0000313|EMBL:BAL98032.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosu
cn_combo_scaffold_122_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10988..11542
DNA (555bp) protein (185aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
apt; adenine phosphoribosyltransferase Apt (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LP92_9BURK
cn_combo_scaffold_122_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11550..12242
DNA (693bp) protein (231aa)
h16_A1622; protein-L-isoaspartate carboxylmethyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Pseudomonas sp. GM55 RepID=J3GY25_9PSED
protein-L-isoaspartate O-methyltransferase
cn_combo_scaffold_122_13
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12481..12693
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:KFB66184.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
cn_combo_scaffold_122_14
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12694..12933)
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:KFB66182.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
cn_combo_scaffold_122_15
unknown

Not on your lists

13020..13511
DNA (492bp) protein (164aa)

This feature has no annotations

cn_combo_scaffold_122_16
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13451..14851)
DNA (1401bp) protein (467aa)
tRNA modification GTPase MnmE {ECO:0000255|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000255|HAMAP-Rule:MF_00379};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Met
tRNA modification GTPase MnmE n=2 Tax=Methylibium RepID=MNME_METPP
trmE; tRNA modification GTPase TrmE
cn_combo_scaffold_122_17
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15106..16755)
DNA (1650bp) protein (550aa)
Membrane protein insertase YidC n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LP90_9BURK
yidC; protein translocase subunit YidC; K03217 preprotein translocase subunit YidC Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
yidC; protein translocase subunit YidC
cn_combo_scaffold_122_18
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16752..17147)
DNA (396bp) protein (132aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LP89_9BURK
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
cn_combo_scaffold_122_19
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17167..17460)
DNA (294bp) protein (98aa)
Ribonuclease P protein component {ECO:0000256|SAAS:SAAS00143752}; EC=3.1.26.5 {ECO:0000256|SAAS:SAAS00143815};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rub
Ribosomal protein S5 domain protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HYF1_RUBGI
ribosomal protein S5 domain protein
cn_combo_scaffold_122_20
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17665..17805)
DNA (141bp) protein (47aa)
50S ribosomal protein L34 n=12 Tax=Comamonadaceae RepID=RL34_ACIAC
rpmH; 50S ribosomal protein L34
ribosomal protein l34; K02914 large subunit ribosomal protein L34 Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
cn_combo_scaffold_122_21
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18192..19697
DNA (1506bp) protein (502aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK09_RUBGI
dnaA; chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Ru
cn_combo_scaffold_122_22
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19959..21068
DNA (1110bp) protein (370aa)
dnaN; DNA polymerase III beta subunit DnaN (EC:2.7.7.7)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=983917 species="Bacter
DNA polymerase III subunit beta n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK10_RUBGI
cn_combo_scaffold_122_23
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21198..23693
DNA (2496bp) protein (832aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=987059 species="Bacteria; Pr
gyrB; DNA gyrase subunit B GyrB (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LM54_9BURK
cn_combo_scaffold_122_24
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23690..24604
DNA (915bp) protein (305aa)
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HUN0_9BURK
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
hypothetical protein
cn_combo_scaffold_122_25
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24618..25496)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DF18_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KHA76122.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacter
tetratricopeptide repeat family protein
cn_combo_scaffold_122_26
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25595..26335)
DNA (741bp) protein (247aa)
Aminoglycoside phosphotransferase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLM9_9BURK
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EGJ09247.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus J
phosphotransferase
cn_combo_scaffold_122_27
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26386..28812
DNA (2427bp) protein (809aa)
LPS-assembly protein LptD n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLM8_9BURK
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubr
ostA; organic solvent tolerance protein
cn_combo_scaffold_122_28
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28805..30142
DNA (1338bp) protein (446aa)
surA; chaperone/peptidyl-prolyl cis-trans isomerase SurA (EC:5.2.1.8)
Chaperone SurA n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLM7_9BURK
Chaperone SurA {ECO:0000256|HAMAP-Rule:MF_01183, ECO:0000256|SAAS:SAAS00043023}; Peptidyl-prolyl cis-trans isomerase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Rotamase SurA {ECO:0000256|HAMAP-Rule:MF_01
cn_combo_scaffold_122_29
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


30085..30930
DNA (846bp) protein (282aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A {ECO:0000255|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000255|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=RSMA_METPP
cn_combo_scaffold_122_30
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30976..31185)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXX7_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL97864.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 10
Displaying items 1-30 of 152 in total

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