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cn_combo_scaffold_122_27

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 26386..28812

Top 3 Functional Annotations

Value Algorithm Source
LPS-assembly protein LptD n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLM8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 809.0
  • Bit_score: 826
  • Evalue 2.50e-236
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubr similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 809.0
  • Bit_score: 826
  • Evalue 3.50e-236
ostA; organic solvent tolerance protein similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 814.0
  • Bit_score: 820
  • Evalue 5.10e-235

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Taxonomy

Rubrivivax benzoatilyticus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2427
ATGAAGTGCCCCGCAGCCGTCCTGCGCTTGCTGCCTCTGGCCGTCGCGGGGCTGGCGGCCTGCCCGCAGGCCCAGTCGCAGACGCCCGTGCCGGCGCCCTCGTCGCTGCCGTCCGAGGCCCTGGCGTGCGCGCCGACGAAGCCGCCGAGGCCGGGGCCCTCGCGCGCCGCGCCGTCGGAGCCGCAGCCGGTGCGGCTGCAGGCGCGCGAAGTGCGAGGTCGGCCCGACATCGATGCCGAGGCCGAAGGCGAAGTGCGGCTGCAGCGCGGCCCGCTGCTGCTGCAGGCCGACCGGCTGGGCTACGAGCAGGTGCAGGACCTGGTGCGCGCGCGCGGGCAGGTGAGCATCGAGCACCCGAGCGGCCGCTACAGCGGCAGCGAGCTGCAACTGCAGCTCGAGCGCTTCGAGGGCTTCTTCCTGCAACCGCGCTACGAGTTCGAGCGCGTGCAGGCCGGCGGCGGTGCCGAGCGCATCGACTTCCTCGACCGCGAGCGCTCGGTGGTGGAGAAGGGCTGGTACACGAGCTGCCCGCGCGAAGACGTCGTCTCCCCGACCGGCGAAGGCGGCACGCCGCGACCGGACTGGGTGCTGCAGAGCGACCGCGTGCGGCTGGACTTCGAGGCCAACGAGGGCATCGCCGAAGGCGCCGTGCTGCGCTTCATGAACGTGCCCATCCTCGCGCTGCCGACGATGAGCTTCCCGCTCGGCGAGGGCCGCAAGTCGGGCTGGCTGCCGCCGACGCTGGACATCGACACGCGCAGCGGCCTGAGCGTGGCCGTGCCCTACTACTGGAACCTCGCGCCCAACCGCGATGCCACGCTCACGCCGAGGATCATCACGCGGCGCGGCGTCGGCGCGAGCGGCGAGTTTCGCTACCTGGAGCCGGCGGTCTCAGGGCGCATCGAGGGCGAACTGCTGCCAGACGACCGCCTTGCGGGCCGATCGCGCTGGCTGCTGTCGACCGAGCACGAGGGCCAGCTGCCCTTCGCCGGGCGCTGGCACCTGGATGCGCTGCGCGTCTCCGACGACGCCTGGTGGAAGGACTTTCCGCTCGACGCGCGCAGCCTCACGCCGCGGCTGCTGCCGCAGCGCCTGGCCGCCGAGCGCGAGCTGGACTTCGGCTGGGGCCAGGGCCTGGCCTACGCGCGCATGCTGCGCTGGCAGGTGCTGCAGGGCAGCGACCAGCGTGTCGTGCCGCCCTACGAACGTGCGCCGCAGATCGGCGTGCAGCTCGATGGGCCGCTGGCCGGCGGCCTGCGTTACGCGCTGCAGGCGGAGACCACGCGCTTCGTCCGGGCAGCCGACGGTGCGGACCTGGCGGGCCCCGGGAGCAGTGCGGCGTCCGCCTCGGGCTGGCGCAGCCACCTGCTGGCGGAGGTCTCGAAGCGCCTGGGCCACGACGGGGCCTGGCTGGCGCCGCGACTGGCGCTCAACGCCGCCAGCTACGCGCTGGACCAGCCGCTGGACGACGGGCGTCGCCGTGCCACGCGCAGCATCCCCAGCTTCAGCGTCGAGGGCGGCCTGACCTTCGAGCGCGACCTGGCGCTGTTCGGCCGCGCGCTGCGGCAGACGCTGGAACCGCGCGCGCTCTACGTCAACACGCCCTGGCGCGACCAGGCGGCGCTGCCCAACTTCGACTCCGCCGCGCGCGACATCAATTTCGATTCGATCTTCGCCGACAACGCCTTCACCGGGATCGACCGCGTCTCGGACGCCCACCAGGTGACGCTGGGTGTGACGACGCGCCTGCTGGACGCCGGCAGCGGCGCCGAGGCCGGGCGGCTTGCGCTGGCGCAGCGCTACCTGCTGCGCGATCAACGCATCACCCCCGAGGGCACCACGCTGACGCGCCGCGCCTCGGACCTGTTCGCGCTCGGCGGTGCCACGCTCGCGCGCGGCCTGGCCTTCGACCTCGCGCTGCAGTACAGCCCCGATCAGCGGCGCACCGTGCGCAGCGTGGGCTCGCTGCGCTGGAACCCGGGCGAGTTCCGCACCTTGAGCACGACCTACCGCTTCACGCGTGGCCTGGCCGAACAGGTGGAGCTGGGCTGGCAATGGCCGTTGTGGAAGCTGGCGCGCAGCGCGCAAACGGCAGGCGTGGGGGCCGGCAGCGGCGGCGGCAAGGCCTGCGGCGGGATCTTGTACACCGTCGGCCGCGTCAACTACAGCCTGCGCGACAGTCGCGTCACCGACTCCATCCTCGGCTTCGAGTACGACGCCGGCTGCTGGATCCTGCGCCTCGTCGGCGAGCGCCTGTCCACCGGGCGCAGCGAGGCCACGACGCACCTGCTGCTGCAGCTCGAGCTGGTGGGTCTGTCGCGCCTGGGCTCCAATCCGCTGCGGGTCTTGAAGGACAATATCCCCGGCTATCGCCTGCTGCGCGACGGGCACACCCAACCGACTCCTGCGCCTCCCCGCTATGACTGA
PROTEIN sequence
Length: 809
MKCPAAVLRLLPLAVAGLAACPQAQSQTPVPAPSSLPSEALACAPTKPPRPGPSRAAPSEPQPVRLQAREVRGRPDIDAEAEGEVRLQRGPLLLQADRLGYEQVQDLVRARGQVSIEHPSGRYSGSELQLQLERFEGFFLQPRYEFERVQAGGGAERIDFLDRERSVVEKGWYTSCPREDVVSPTGEGGTPRPDWVLQSDRVRLDFEANEGIAEGAVLRFMNVPILALPTMSFPLGEGRKSGWLPPTLDIDTRSGLSVAVPYYWNLAPNRDATLTPRIITRRGVGASGEFRYLEPAVSGRIEGELLPDDRLAGRSRWLLSTEHEGQLPFAGRWHLDALRVSDDAWWKDFPLDARSLTPRLLPQRLAAERELDFGWGQGLAYARMLRWQVLQGSDQRVVPPYERAPQIGVQLDGPLAGGLRYALQAETTRFVRAADGADLAGPGSSAASASGWRSHLLAEVSKRLGHDGAWLAPRLALNAASYALDQPLDDGRRRATRSIPSFSVEGGLTFERDLALFGRALRQTLEPRALYVNTPWRDQAALPNFDSAARDINFDSIFADNAFTGIDRVSDAHQVTLGVTTRLLDAGSGAEAGRLALAQRYLLRDQRITPEGTTLTRRASDLFALGGATLARGLAFDLALQYSPDQRRTVRSVGSLRWNPGEFRTLSTTYRFTRGLAEQVELGWQWPLWKLARSAQTAGVGAGSGGGKACGGILYTVGRVNYSLRDSRVTDSILGFEYDAGCWILRLVGERLSTGRSEATTHLLLQLELVGLSRLGSNPLRVLKDNIPGYRLLRDGHTQPTPAPPRYD*