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cn_combo_scaffold_499

Alias: RUB134_19

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Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_499_1
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..520
DNA (519bp) protein (173aa)
Putative oligopeptide ABC transporter ATP binding protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVQ9_9BURK
Putative oligopeptide ABC transporter ATP binding protein {ECO:0000313|EMBL:EGJ12427.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubr
ABC transporter ATP-binding protein
cn_combo_scaffold_499_2
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

558..1382
DNA (825bp) protein (275aa)
ABC transporter related protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVR0_9BURK
ABC transporter related protein {ECO:0000313|EMBL:EGJ12428.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2
putative ABC transporter ATP-binding protein
cn_combo_scaffold_499_3
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1410..2828
DNA (1419bp) protein (473aa)
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTG6_9BURK
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit {ECO:0000313|EMBL:EHR69039.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiale
putative amidase
cn_combo_scaffold_499_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2865..6176)
DNA (3312bp) protein (1104aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:BAL97921.1}; EC=2.7.13.3 {ECO:0000313|EMBL:BAL97921.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; R
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HY34_RUBGI
cn_combo_scaffold_499_5
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6234..7073)
DNA (840bp) protein (280aa)
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
pyrF; orotidine 5'-phosphate decarboxylase PyrF (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LML6_9BURK
cn_combo_scaffold_499_6
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7102..8514)
DNA (1413bp) protein (471aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
purB; adenylosuccinate lyase PurB (EC:4.3.2.2)
adenylosuccinate lyase n=1 Tax=Caldimonas manganoxidans RepID=UPI000364532B
cn_combo_scaffold_499_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8698..10053
DNA (1356bp) protein (452aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSI0_9BURK
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
uncharacterized NAD(FAD)-dependent dehydrogenase
cn_combo_scaffold_499_8
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10081..10422
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSH9_9BURK
Putative uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
cn_combo_scaffold_499_9
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10419..11057
DNA (639bp) protein (213aa)
Type 11 methyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSI8_9BURK
type 11 methyltransferase Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
type 11 methyltransferase
cn_combo_scaffold_499_10
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11119..12579
DNA (1461bp) protein (487aa)
Cytochrome c oxidase accessory protein FixG n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRY8_9BURK
Cytochrome c oxidase accessory protein FixG {ECO:0000313|EMBL:EHR72306.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSH
cytochrome c oxidase cbb3 type, accessory protein FixG rbh
cn_combo_scaffold_499_11
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12585..14105)
DNA (1521bp) protein (507aa)
mmsA; methylmalonate-semialdehyde dehydrogenase MmsA (EC:1.2.1.27)
Methylmalonate-semialdehyde dehydrogenase MmsA {ECO:0000313|EMBL:BAL93460.1}; EC=1.2.1.27 {ECO:0000313|EMBL:BAL93460.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholder
Methylmalonate-semialdehyde dehydrogenase MmsA n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HKC3_RUBGI
cn_combo_scaffold_499_12
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14181..14837
DNA (657bp) protein (219aa)
YecA family protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HKC1_RUBGI
yecA family protein
YecA family protein {ECO:0000313|EMBL:BAL93458.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245
cn_combo_scaffold_499_13
unknown

Not on your lists

14945..15148
DNA (204bp) protein (68aa)

This feature has no annotations

cn_combo_scaffold_499_14
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15173..15595)
DNA (423bp) protein (141aa)
universal stress protein UspA n=1 Tax=Ideonella sp. B508-1 RepID=UPI000345A9DB
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:BAL93454.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain
cn_combo_scaffold_499_15
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15748..16524)
DNA (777bp) protein (259aa)
phosphoesterase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003479D30
Calcineurin-like phosphoesterase {ECO:0000313|EMBL:EGJ09716.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA
putative metallophosphoesterase
cn_combo_scaffold_499_16
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16521..18401)
DNA (1881bp) protein (627aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:
pckG; phosphoenolpyruvate carboxykinase [GTP] PckG (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMZ7_9BURK
cn_combo_scaffold_499_17
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18784..19638
DNA (855bp) protein (285aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rul
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMZ4_9BURK
hypothetical protein
cn_combo_scaffold_499_18
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19671..20465)
DNA (795bp) protein (265aa)
Putative phosphoprotein phosphatase n=1 Tax=Thauera phenylacetica B4P RepID=N6ZTV0_9RHOO
Putative phosphoprotein phosphatase {ECO:0000313|EMBL:ENO95569.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenyl
protein serine/threonine phosphatase
cn_combo_scaffold_499_19
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20465..21835)
DNA (1371bp) protein (457aa)
FHA domain-containing protein n=1 Tax=Burkholderia sp. SJ98 RepID=K8RD19_9BURK
Signal peptide protein {ECO:0000313|EMBL:KAK48006.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiang
FHA domain-containing protein
cn_combo_scaffold_499_20
RLO_PLX_64_10, Bacteria

Not on your lists

comp(21950..22627)
DNA (678bp) protein (226aa)
XRE family transcriptional regulator n=1 Tax=Methyloversatilis universalis RepID=UPI000371003A
two component LuxR family transcriptional regulator; K07684 two-component system, NarL family, nitrate/nitrite response regulator NarL Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
two component LuxR family transcriptional regulator
cn_combo_scaffold_499_21
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22624..24564)
DNA (1941bp) protein (647aa)
signal transduction histidine kinase, nitrate/nitrite-specific, NarQ; K07673 two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] Tax=GWA2_Curvibacter_64_110_c
Putative nitrate/nitrite sensor protein narQ n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RDJ5_9RHOO
signal transduction histidine kinase, nitrate/nitrite-specific, NarQ
cn_combo_scaffold_499_22
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24638..25738)
DNA (1101bp) protein (367aa)
C4-dicarboxylate transporter/malic acid transport protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4S9_ACIDE
C4-dicarboxylate transporter/malic acid transport protein {ECO:0000313|EMBL:EER60528.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax
C4-dicarboxylate transporter
cn_combo_scaffold_499_23
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25735..26385)
DNA (651bp) protein (217aa)
lysine transporter LysE n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003456457
Rht family transporter amino acid efflux protein
Putative Rht family transporter, amino acid efflux {ECO:0000313|EMBL:ABM96319.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibiu
cn_combo_scaffold_499_24
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26382..27578)
DNA (1197bp) protein (399aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WU72_9BURK
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EHR69394.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
cn_combo_scaffold_499_25
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27705..29510)
DNA (1806bp) protein (602aa)
aceK; isocitrate dehydrogenase kinase/phosphatase AceK (EC:2.7.11.5)
Isocitrate dehydrogenase kinase/phosphatase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXF2_RUBGI
Isocitrate dehydrogenase kinase/phosphatase {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063056}; Short=IDH kinase/phosphatase {ECO:0000256|HAMAP-Rule:MF_00747};; Short=IDHK/P {ECO:0000256
cn_combo_scaffold_499_26
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29522..30208)
DNA (687bp) protein (229aa)
carbonate dehydratase (EC:4.2.1.1); K01673 carbonic anhydrase [EC:4.2.1.1] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
carbonate dehydratase (EC:4.2.1.1)
Carbonic anhydrase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WU69_9BURK
cn_combo_scaffold_499_27
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30285..31463)
DNA (1179bp) protein (393aa)
ivd; putative isovaleryl-CoA dehydrogenase (EC:1.3.99.10)
Putative isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:BAL97691.1}; EC=1.3.8.4 {ECO:0000313|EMBL:BAL97691.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rub
isovaleryl-CoA dehydrogenase n=1 Tax=Caldimonas manganoxidans RepID=UPI00036AE31C
cn_combo_scaffold_499_28
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31558..32046)
DNA (489bp) protein (163aa)
Transcriptional regulator, MerR family n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXF5_RUBGI
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:BAL97692.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus
cn_combo_scaffold_499_29
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32334..33203)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003804F14
hypothetical protein; K07043 Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
hypothetical protein
cn_combo_scaffold_499_30
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33244..33879)
DNA (636bp) protein (212aa)
gmhB; D,D-heptose 1,7-bisphosphate phosphatase (EC:3.1.3.-)
D,D-heptose 1,7-bisphosphate phosphatase GmhB {ECO:0000313|EMBL:BAL97701.1}; EC=3.1.3.- {ECO:0000313|EMBL:BAL97701.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXG4_RUBGI
Displaying items 1-30 of 83 in total

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