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cn_combo_scaffold_1447

Alias: RUB134_24

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1447_1
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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88..855
DNA (768bp) protein (256aa)
peptidoglycan biosynthesis-like protein (EC:2.4.2.-)
Putative peptidoglycan biosynthesis-related protein {ECO:0000313|EMBL:ABM96155.1}; EC=2.4.2.- {ECO:0000313|EMBL:ABM96155.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
Putative peptidoglycan biosynthesis-related protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKR6_METPP
cn_combo_scaffold_1447_2
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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892..1494
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRW4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11082.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC
hypothetical protein
cn_combo_scaffold_1447_3
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1491..2069
DNA (579bp) protein (193aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFN3_ACIET
alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACM34384.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
cn_combo_scaffold_1447_4
Burkholderia thailandensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2198..2692
DNA (495bp) protein (165aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
3-dehydroquinate dehydratase n=2 Tax=Burkholderia thailandensis RepID=Q2SZD8_BURTA
cn_combo_scaffold_1447_5
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2759..3220
DNA (462bp) protein (154aa)
Biotin carboxyl carrier protein n=2 Tax=Acidovorax RepID=A1WBX6_ACISJ
acetyl-CoA carboxylase, biotin carboxyl carrier protein
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:ACM34383.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;
cn_combo_scaffold_1447_6
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3231..4580
DNA (1350bp) protein (450aa)
accC; acetyl-CoA carboxylase, biotin carboxylase AccC (EC:6.3.4.14 6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase AccC {ECO:0000313|EMBL:BAL97562.1}; EC=6.3.4.14 {ECO:0000313|EMBL:BAL97562.1};; EC=6.4.1.2 {ECO:0000313|EMBL:BAL97562.1};; TaxID=983917 species="Bacteria; Pr
Acetyl-CoA carboxylase, biotin carboxylase AccC n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX25_RUBGI
cn_combo_scaffold_1447_7
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4583..5512
DNA (930bp) protein (310aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
prmA; ribosomal protein L11 methyltransferase PrmA (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRN1_9BURK
cn_combo_scaffold_1447_8
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5545..6615
DNA (1071bp) protein (357aa)
MJ0042 family finger-like protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX27_RUBGI
hypothetical protein
MJ0042 family finger-like protein {ECO:0000313|EMBL:BAL97564.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (stra
cn_combo_scaffold_1447_9
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6657..7562
DNA (906bp) protein (302aa)
sugar kinase transferase (EC:2.7.1.-)
Putative sugar kinase transferase protein {ECO:0000313|EMBL:ABM96163.1}; EC=2.7.1.- {ECO:0000313|EMBL:ABM96163.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Putative sugar kinase transferase protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKS4_METPP
cn_combo_scaffold_1447_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7645..7986)
DNA (342bp) protein (114aa)
UPF0235 protein RGE_44710 n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXS0_RUBGI
hypothetical protein
UPF0235 protein RGE_44710 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain N
cn_combo_scaffold_1447_11
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8084..8539)
DNA (456bp) protein (152aa)
Histone n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2IAY3_9BURK
Histone {ECO:0000313|EMBL:ESJ12035.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
hc2x; histone H1 protein
cn_combo_scaffold_1447_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9083..9709)
DNA (627bp) protein (209aa)
ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD (EC:3.5.1.28)
N-acetyl-anhydromuranmyl-L-alanine amidase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRM5_9BURK
N-acetyl-anhydromuranmyl-L-alanine amidase {ECO:0000313|EMBL:EGJ10993.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoati
cn_combo_scaffold_1447_13
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9753..11285)
DNA (1533bp) protein (511aa)
Two-component system response regulator PilR n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX33_RUBGI
pilR; two-component system response regulator PilR
Two-component system response regulator PilR {ECO:0000313|EMBL:BAL97570.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelati
cn_combo_scaffold_1447_14
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11294..13261)
DNA (1968bp) protein (656aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" sourc
pilS; two-component system sensor kinase PilS (EC:2.7.13.3)
Signal transduction histidine kinase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRM3_9BURK
cn_combo_scaffold_1447_15
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13281..13520)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX35_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL97572.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 10
cn_combo_scaffold_1447_16
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13596..14411)
DNA (816bp) protein (272aa)
Putative cytochrome c assembly protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX36_RUBGI
putative cytochrome c assembly protein
Putative cytochrome c assembly protein {ECO:0000313|EMBL:BAL97573.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus
cn_combo_scaffold_1447_17
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14457..15836
DNA (1380bp) protein (460aa)
Signal recognition particle protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX37_RUBGI
ffh; signal recognition particle subunit FFH/SRP54 rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhol
cn_combo_scaffold_1447_18
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16061..16768
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WME3_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR73108.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacter
hypothetical protein
cn_combo_scaffold_1447_19
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16813..17877)
DNA (1065bp) protein (355aa)
Signal recognition particle receptor FtsY n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRL9_9BURK
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria;
ftsY; signal recognition particle receptor FtsY rbh
cn_combo_scaffold_1447_trna_1
unknown

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17919..17992
DNA (74bp)
transferRNA
cn_combo_scaffold_1447_20
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18073..18453
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SD56_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM93495.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM
cn_combo_scaffold_1447_21
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18450..19802
DNA (1353bp) protein (451aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Caldimonas manganoxidans RepID=UPI00036564AD
(dimethylallyl)adenosine tRNA methylthiotransferase
cn_combo_scaffold_1447_22
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19842..20120)
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WMJ6_9BURK
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
hypothetical protein
cn_combo_scaffold_1447_23
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20239..21537
DNA (1299bp) protein (433aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
Glutamyl-tRNA reductase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX42_RUBGI
cn_combo_scaffold_1447_24
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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21598..22698
DNA (1101bp) protein (367aa)
Peptide chain release factor 1 n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX43_RUBGI
prfA; peptide chain release factor RF-1 PrfA
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Ru
cn_combo_scaffold_1447_25
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22698..23516
DNA (819bp) protein (273aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
hemK; protein methyltransferase HemK (EC:2.1.1.-)
Release factor glutamine methyltransferase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRL3_9BURK
cn_combo_scaffold_1447_26
unknown

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23617..24186
DNA (570bp) protein (190aa)

This feature has no annotations

cn_combo_scaffold_1447_27
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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24308..24622
DNA (315bp) protein (105aa)
Glutaredoxin n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRL1_9BURK
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
grxD; glutaredoxin-4
cn_combo_scaffold_1447_28
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24642..25232)
DNA (591bp) protein (197aa)
Putative signal peptide protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRK9_9BURK
Putative signal peptide protein {ECO:0000313|EMBL:EGJ10977.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2
putative lytic transglycosylase
cn_combo_scaffold_1447_29
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25282..27030)
DNA (1749bp) protein (583aa)
proS; prolyl-tRNA synthetase ProS (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:000025
Proline--tRNA ligase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX49_RUBGI
Displaying items 1-30 of 39 in total

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