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cn_combo_scaffold_64_33

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(40410..41219)

Top 3 Functional Annotations

Value Algorithm Source
LigB family dioxygenase {ECO:0000313|EMBL:EXI89847.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 265.0
  • Bit_score: 374
  • Evalue 9.40e-101
extradiol ring-cleavage dioxygenase class III protein subunit B id=5082900 bin=GWF1_Burkholderiales_GWF1_66_17 species=Thauera phenylacetica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 272.0
  • Bit_score: 342
  • Evalue 3.70e-91
extradiol ring-cleavage dioxygenase class III protein subunit B similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 272.0
  • Bit_score: 336
  • Evalue 9.70e-90

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Taxonomy

Candidatus Accumulibacter sp. BA-93 → Candidatus Accumulibacter → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGTCGCGCCTGCCCAGCCTGTTCGTCTCGCACGGCGCGCCCAGTTTCGCGCTCGAGCCCGGTCTGGCCGGGGCGGGGCTGACGGCGCTGGGCCGCGCGCTGCCTCGCCCGCAGGCCGTGCTGGTGGTCTCGCCGCACTGGATGGCGCCCACGCCGCGCGTGGGCACCGCGCTGCAGCCGCAGACCCTGCACGACTTCGGTGGCTTCGACCCCGCGCTGTACCAGTTGAGCTACCCCGCCCGCGGGCATCCGGCGCTGGCGCAGCGCACGGTCGAGCGCCTGAACCAGGCCGGTTGGCCCGCGCAGGCCTCGGAACGGCGCGGCCTGGACCACGGCGCCTGGGTGCCGCTGATGCACCTGTTCCCCGCGGCCGACGTGCCGGTGTTCCAGGTCTCGCTGCCGTCGCGGCTCGACGCCGGGCGCGCCTGGGCCCTCGGGCAAGCGCTGGCGCCGCTGGCCGGCGAGGGCGCGCTGATCGTCGGCTCGGGCAGCCTGACGCACAACCTCGACGAGTTCTGCAGCGGCCAGGGGCAGGAGGAGGCCTATGCCGCCGCCTTCGCGGCCTGGGTGCGCGAGGCCGTGGAACAGGGCGACCGTGACCGCCTGCTGCGCACGCTCGATGACGCCCCGCAGGCCCGCCGCGCCCACCCGACGCCCGAGCACTTCTGGCCCCTGCTGGTGGCCGCCGGCGCCGCCGACCAGGCGCAGCCGGTACGGGTGATCGAAGGCGGCATCGTCGACGGCGTGCTGGCCATGGATGCCTATGCCTTCGGCCTGGCTGCGCGAGGGGTTGCGGCGGCGACGGCTTGA
PROTEIN sequence
Length: 270
MSRLPSLFVSHGAPSFALEPGLAGAGLTALGRALPRPQAVLVVSPHWMAPTPRVGTALQPQTLHDFGGFDPALYQLSYPARGHPALAQRTVERLNQAGWPAQASERRGLDHGAWVPLMHLFPAADVPVFQVSLPSRLDAGRAWALGQALAPLAGEGALIVGSGSLTHNLDEFCSGQGQEEAYAAAFAAWVREAVEQGDRDRLLRTLDDAPQARRAHPTPEHFWPLLVAAGAADQAQPVRVIEGGIVDGVLAMDAYAFGLAARGVAAATA*