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cn_combo_scaffold_175_10

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 13358..13714

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HS09_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 118.0
  • Bit_score: 225
  • Evalue 3.80e-56
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 118.0
  • Bit_score: 225
  • Evalue 1.10e-56
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="R similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 118.0
  • Bit_score: 225
  • Evalue 5.30e-56

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Taxonomy

Rubrivivax gelatinosus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 357
ATGCCTCGCGTCAAACGTGGCGTCACCGCGCACGCCCGCCACAAGAAGATCCTGAAGCTCGCCAAGGGCTTCCGCGGTCGCCGCAAGAACGTCTTCCGCATCGCCAAGCAGGCGGTGATGAAGGCCGGCCAGTACGCCTACCGTGACCGCCGCACGCGCAAGCGGGTGTTCCGCCAGCTCTGGATCGCGCGCATCAACGCGGCCAGCCGCGAGCTCGGCGTCACCTACAGCAAGTTCATGGCCGGCCTGAAGAAGGCGCAGATCGACATCGACCGCAAGGTCCTCGCTGACCTCGCCGTCAACGACCCCGCTGCCTTCGGCAGCATCGTCGAGAAGGTGAAGGCCCAACTCGCGTGA
PROTEIN sequence
Length: 119
MPRVKRGVTAHARHKKILKLAKGFRGRRKNVFRIAKQAVMKAGQYAYRDRRTRKRVFRQLWIARINAASRELGVTYSKFMAGLKKAQIDIDRKVLADLAVNDPAAFGSIVEKVKAQLA*