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cn_combo_scaffold_1460_24

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 25824..26492

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide export protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN17_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 209.0
  • Bit_score: 311
  • Evalue 7.50e-82
Polysaccharide export protein {ECO:0000313|EMBL:EGJ09735.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 209.0
  • Bit_score: 311
  • Evalue 1.00e-81
putative polysaccharide export outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 195.0
  • Bit_score: 300
  • Evalue 3.70e-79

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Taxonomy

Rubrivivax benzoatilyticus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGATTGCCGTGAACAGCCTCTTCCAGACGTTTCGTGTGGCGCGTGCCGCTCGTGCCGCCCGCGTGGCGCTTGGCGGCCTGATGGTGGCCGCGCTCGCGCAGCTCGCCGGCTGCGCCGGCGGGCCGAGCCACCCACCGGCGCCGCAGACGCTGCCCGCGCAACTCGACTACACCTACATCATCGGCCCGGGCGACGGCCTCAACGTCAGCGTCTGGCGCAACCCGGAGCTGTCGATGTCGGTCGTCGTGCGCCCGGACGGCAAGGTCAACGCGCCCCTGGTCGACGAGCTCGTGGCCCAGGGCAAGACGCCCGAGCAGCTGGCGCGCGAGGTCGAGAAGATCCTCGGCAAGTACGTCCGCGATCCCGTCGTGACGGTGATGGTGACGGGCTTCGTCGGCCCCTACAGCGAGCAGATCCGCGTCGTCGGCGAGGCCGCCAAGCCGCAGTTCCTGCCCTACAAGAACAAGATGACGCTGCTGGACGTGATGATCGCCGTCGGCGGCCTCACCGACTTCGCCTCCGGCAACAAGGCCAGCATCCTGCGCACCGCCGAAGGCAACAAGCAGTACGCCGTGCGCCTCGAGGACCTGATCAAGCGCGGCGACGTCGACGCCAACGTCGAGATGCGCCCGGGCGACATCCTCATCATTCCGCAGAGCCTCTTCTGA
PROTEIN sequence
Length: 223
MIAVNSLFQTFRVARAARAARVALGGLMVAALAQLAGCAGGPSHPPAPQTLPAQLDYTYIIGPGDGLNVSVWRNPELSMSVVVRPDGKVNAPLVDELVAQGKTPEQLAREVEKILGKYVRDPVVTVMVTGFVGPYSEQIRVVGEAAKPQFLPYKNKMTLLDVMIAVGGLTDFASGNKASILRTAEGNKQYAVRLEDLIKRGDVDANVEMRPGDILIIPQSLF*