ggKbase home page

cn_combo_scaffold_2126_24

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 23833..24489

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN31_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 179.0
  • Bit_score: 211
  • Evalue 1.00e-51
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 179.0
  • Bit_score: 211
  • Evalue 1.50e-51
rimM; 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 179.0
  • Bit_score: 209
  • Evalue 1.10e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubrivivax benzoatilyticus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGCCCGACGAACGCAAGGCCGGCCGGCAGCGCAGGCCGGCCGCCGCGAAGCCGGGCCCGCAGGGTCCGGCTTCTTCCTTTGCGCAAGGCGATGTCGGGCGCGATTCCCGACTGCCCGAGGACGCGGTCGAGGTCGCGCGCGTGCTCGGCGCCTGGGGCGTGAAGGGCGGCCTCAGGCTCAAACCCTATTCGGCGCGGCCACAGGCGCTCCTGACCGCGAGACGCTGGTGGCTGCTCGCCGGCGAGCGCGCCATGCCCGCGGACGCCGGGGCCGACCTGCAGCCGCGGCTGCTCGACGTCGCGGGCGTGCGCGTGCAGGGTGAACTGGTCGTGGCCGAGAGTCGCGAGTTGCACGACCGCGACGCCGCGCAGGCGCTCGCCGGCGCACGCGTCTTCGTGCCGCGTGCGGAATTCCCTCCGACCGCGGTGGACGAGTTCTACTGGGTCGACCTGATTGGACTGTCGGTCTGCAACCGCGCCGGCCGCATGCTCGGCCGCGTCACCGATCTGATCGAGACCGGCCCCCACAGCGTGCTGTGCATCGAGCCGGCCAGTGCGGACGCCGAAGAACTGCTGATCCCTTTCGTCGACGCCTATGTCGATCGCGTCGATCGTGCCGGCGGCACGATCCACGTCGACTGGGAGCCTGAGGCCTGA
PROTEIN sequence
Length: 219
MPDERKAGRQRRPAAAKPGPQGPASSFAQGDVGRDSRLPEDAVEVARVLGAWGVKGGLRLKPYSARPQALLTARRWWLLAGERAMPADAGADLQPRLLDVAGVRVQGELVVAESRELHDRDAAQALAGARVFVPRAEFPPTAVDEFYWVDLIGLSVCNRAGRMLGRVTDLIETGPHSVLCIEPASADAEELLIPFVDAYVDRVDRAGGTIHVDWEPEA*