Alias: RUB134_28
name | lists | location/seqs | annotations | notes |
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cn_combo_scaffold_2126_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(269..679)
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hypothetical protein id=5079883 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
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cn_combo_scaffold_2126_2
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(762..2036)
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Putative M16B family peptidase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK31_RUBGI
peptidase M16 domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
putative M16B family peptidase
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cn_combo_scaffold_2126_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
2126..3493
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argG; argininosuccinate synthase ArgG (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009500}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
Argininosuccinate synthase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HND0_RUBGI
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cn_combo_scaffold_2126_4
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(3509..4552)
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L-asparaginase II n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTK1_9BURK
L-asparaginase II {ECO:0000313|EMBL:EGJ11669.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35
L-asparaginase, thermolabile family protein
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cn_combo_scaffold_2126_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
4639..5361
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Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4V7_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
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cn_combo_scaffold_2126_6
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(5410..5850)
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Universal stress protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SLK4_METPP
Universal stress protein family protein {ECO:0000313|EMBL:EWS59474.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-
universal stress protein
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cn_combo_scaffold_2126_7
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(5987..6784)
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Putative transferase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTK6_9BURK
Putative transferase {ECO:0000313|EMBL:EGJ11674.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA
peptidase C26 family protein
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cn_combo_scaffold_2126_8
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
6913..8583
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Na/Pi-cotransporter n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WP19_9BURK
Na/Pi-cotransporter {ECO:0000313|EMBL:EHR73227.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001
Na/Pi-cotransporter II-like protein
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cn_combo_scaffold_2126_9
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
8673..10364
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Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=987059 spe
fhs; formate-tetrahydrofolate ligase Fhs (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LM33_9BURK
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cn_combo_scaffold_2126_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
10431..11897
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PAS sensor protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000361FBA4
FOG: PAS/PAC domain {ECO:0000313|EMBL:GAD20633.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
diguanylate cyclase
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cn_combo_scaffold_2126_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
12154..12741
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hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI000372504F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAD24259.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
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cn_combo_scaffold_2126_12
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(12856..13785)
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Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:00002
argF; ornithine carbamoyltransferase ArgF (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM41_9BURK
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cn_combo_scaffold_2126_13
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(13782..14996)
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argD; acetylornithine aminotransferase ArgD (EC:2.6.1.11)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=983917 species="Bacteria; Prot
Acetylornithine aminotransferase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNT7_RUBGI
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cn_combo_scaffold_2126_14
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
15249..15572
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Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM39_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR71924.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
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cn_combo_scaffold_2126_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(15671..15976)
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30S ribosomal protein S20 n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM38_9BURK
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium
rpsT; 30S ribosomal protein S20
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cn_combo_scaffold_2126_16
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
16133..17692
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Integral membrane protein MviN n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR31_9BURK
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus J
mviN; integral membrane protein MviN
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cn_combo_scaffold_2126_17
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
17869..18537
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DnaA-homolog protein Hda n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNU2_RUBGI
hda; DnaA-like protein Hda
DnaA-homolog protein Hda {ECO:0000313|EMBL:BAL94679.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 1
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cn_combo_scaffold_2126_18
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
18596..19264
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Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR28_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10796.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC
putative phosphatase
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cn_combo_scaffold_2126_19
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
19261..20958
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pcnB; poly(A) polymerase PcnB (EC:2.7.7.19)
Poly(A) polymerase (Fragment) n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR27_9BURK
Poly(A) polymerase {ECO:0000313|EMBL:EGJ10795.1}; Flags: Fragment;; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticu
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cn_combo_scaffold_2126_20
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
21172..21819
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Phosphate transport regulator related to PhoU n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM29_9BURK
Phosphate transport regulator related to PhoU {ECO:0000313|EMBL:EHR71914.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JO
hypothetical protein
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cn_combo_scaffold_2126_21
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
21856..22866
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Phosphate transporter n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN28_9BURK
Phosphate transporter {ECO:0000313|EMBL:EGJ09746.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BA
pit; putative low-affinity inorganic phosphate transporter Pit
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cn_combo_scaffold_2126_22
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(22879..23310)
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Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNU9_RUBGI
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
hypothetical protein
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cn_combo_scaffold_2126_23
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
23562..23810
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30S ribosomal protein S16 n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNV1_RUBGI
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain N
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cn_combo_scaffold_2126_24
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
23833..24489
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Ribosome maturation factor RimM n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN31_9BURK
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" sou
rimM; 16S rRNA processing protein RimM
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cn_combo_scaffold_2126_25
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
24504..25256
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tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM24_9BURK
trmD; tRNA (guanine-N1-)-methyltransferase TrmD
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cn_combo_scaffold_2126_26
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
25333..25686
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50S ribosomal protein L19 n=1 Tax=Ideonella sp. B508-1 RepID=UPI000346EFB6
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source=
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cn_combo_scaffold_2126_27
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
26013..26714
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NTP pyrophosphohydrolase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM22_9BURK
NTP pyrophosphohydrolase {ECO:0000313|EMBL:EHR71907.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
NUDIX hydrolase
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cn_combo_scaffold_2126_28
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
26772..27761
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cbiB; cobalamin biosynthesis protein CbiB (EC:6.3.1.10)
Cobalamin biosynthesis protein CobD n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNV6_RUBGI
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus
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cn_combo_scaffold_2126_29
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(27773..28591)
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rsgA; putative ribosome biogenesis GTPase RsgA (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNV7_RUBGI
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cn_combo_scaffold_2126_30
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(28764..30071)
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putative M48A family peptidase; K06013 STE24 endopeptidase [EC:3.4.24.84] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Ste24 endopeptidase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN37_9BURK
putative M48A family peptidase
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