ggKbase home page

cn_combo_scaffold_2827_11

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(9300..10565)

Top 3 Functional Annotations

Value Algorithm Source
Similar to type IV pilin protein PilV n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW52_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 429.0
  • Bit_score: 266
  • Evalue 5.20e-68
type IV pilin protein PilV similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 433.0
  • Bit_score: 266
  • Evalue 1.50e-68
Similar to type IV pilin protein PilV {ECO:0000313|EMBL:BAL97239.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus ( similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 429.0
  • Bit_score: 266
  • Evalue 7.30e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubrivivax gelatinosus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGAGTGTCCGCAGCAGCCCCAGCGCTCGCGCGCGCTCGCGTGGTGTCTCGCTCGTCGAGGCCGTCGTGGCCTTGGCCGTGATGGGTTTCGGCATGCTGGGAATCGCGGCGATGCAGAGCTCGCTGCGGCAGAACTCCGACACCGCCAGGCAACGCGCCGAGGCTACGCGGATCGCCAGTGAAGCGATCGAGGCCATGCGCTCCTACTCGGTGGTCAATGCAAGCTCGGGCAAGGTTTCCTACGCCGACCTGGTGAGCGGCGTGCCGGCCCCGCTCAGCCTGCCGGGCACCATCACGGGAACCAACGCGACCTATACGCGCACGGTGGACGTGACCGACACGGCCGCCCAGAACCGCAAGACCGTCCACGTCAGGATCGAATGGGCCGATCGGAGCGGCCAGCCGCAGGAGCTGGTTCTCAGTACCGAGATCCATCGCAGCCCACCCGAACTCGCCGCCTCGCTGATTGTTCCGGCCTCGGGAACGGTGACCCAGTTTCCCGGCGGCCGCCATCCGACGATTCCGAAGGCGGCGACGATGAACTCGGACGGGACGAGTTCGTTCAGTCCGCCGGGCAGCGGCATTGTCTGGAAATTCAACAACGCCTCGGGCCTCATCCAGGAGACCTGCACCCCGACCTGTGCAGGCGTACATGCCAGGCTCTTGTCAGGCTACGTCGCGTTTGCCACGTCGGCCGTCCAGCCAACAAGCCTGGACGCCGAGTCGCCCCCCAGCGGCGCCATTCCGGCCTTCACGGCCGCGTCGCCCACCGCCGCCGTCGCGCTTCTGCAGACCGCCCCGACCGCGCCGCCCGCGGCGGCGCCGCAGTGCTACCAGGAACTGCTGCCGCCCGCGCCTGCACCCACGAGGATCGTGGCCTACTATTGCGCCGTGTTCACGGACACGACGACGACGCCGAACTACGTCTGGTCCGGACGCGCCATCCTGGCCGCGCTGCCACTGTCCACGCCGCCCGTGGGCATGGGCTCATTGGCCACGTCGGTATCCGACAACAGCGCCGCCGCGTATCGCGTCTGTCGCTACACCACGCGGCAAAACCACGAGGCCGTCGGGAGTGGAGCGCCACCGATGCGCAACCGCGATCACCCGCTCGTCTACGTCAACGTGAACGAGAACCTCGTCAACCAGAACTTCCTGATCATTCGTTCCGGTGACGGGGTGAGCGACGCCTTCGATTGTCCGGACGATGACCCAAGCACGCCCCTGGTCAATGGTCGCACCTGGCACCACCAGCCGTCGAGCTGA
PROTEIN sequence
Length: 422
MSVRSSPSARARSRGVSLVEAVVALAVMGFGMLGIAAMQSSLRQNSDTARQRAEATRIASEAIEAMRSYSVVNASSGKVSYADLVSGVPAPLSLPGTITGTNATYTRTVDVTDTAAQNRKTVHVRIEWADRSGQPQELVLSTEIHRSPPELAASLIVPASGTVTQFPGGRHPTIPKAATMNSDGTSSFSPPGSGIVWKFNNASGLIQETCTPTCAGVHARLLSGYVAFATSAVQPTSLDAESPPSGAIPAFTAASPTAAVALLQTAPTAPPAAAPQCYQELLPPAPAPTRIVAYYCAVFTDTTTTPNYVWSGRAILAALPLSTPPVGMGSLATSVSDNSAAAYRVCRYTTRQNHEAVGSGAPPMRNRDHPLVYVNVNENLVNQNFLIIRSGDGVSDAFDCPDDDPSTPLVNGRTWHHQPSS*