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cn_combo_scaffold_2827_12

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(10562..11893)

Top 3 Functional Annotations

Value Algorithm Source
Similar to fimbrial biogenesis protein PilX n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW51_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 37.5
  • Coverage: 475.0
  • Bit_score: 283
  • Evalue 3.30e-73
fimbrial biogenesis protein PilX similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 475.0
  • Bit_score: 283
  • Evalue 9.40e-74
Similar to fimbrial biogenesis protein PilX {ECO:0000313|EMBL:BAL97238.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatin similarity UNIPROT
DB: UniProtKB
  • Identity: 37.5
  • Coverage: 475.0
  • Bit_score: 283
  • Evalue 4.70e-73

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Taxonomy

Rubrivivax gelatinosus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1332
ATGATCCTCATGCGCACGCCTCGGGCTCCACGAGCCCTGCACCACCGCAACCGACAGCACGGCGCGGCGGCATTGATCGTCGTCATGGTGCTGTTCTTCCTGATCTCGCTCGTCGCCGCCTACTCGAGCAGGAACATCATCTTCGAGCAACGGACCTCCGCGAATCAATACACGTCGACGGCGTCGCTCGAGGCGGCGAACGCAGGACTCGAATGGGCGCTTGGCCTCCTCAACGGATCCCGGATCGATGATTCCTGCACGCCGAGCAGTTCGGTTTCGACAGCATCGTTTCGCGAGCGCTATCTGTCGGTCGATCCGACCAGCGGCATCATCAGTGTCTCGACTGCCGTTCGTGATGGCCCCCAATGGCCTGGCTGCTGGCATGACCGCGCGTCGAATCAGTGGGTCTGCCATTGCCCCGGCAGCGGAACCAGCTCGATAGCCACGACGCCGTCCGACCCGTTCGCTCCTTCGTTTCGAATTCGGTTCATCCAGCTCGACGAAGCGTTTACGGTCACTCCCGCACCGACGACGCGCCCGGGCATCGTCGCGATCGAAGTCAACGGCTGCACCTCCTGGAACAGCGAATGCCTTGATTTCAAGTCCTACACGAAAGACTGGTGCCGCGGCACCGTTTGCGCCCAGCTCGCCTTATCTAGCGGCGTGAAATCCCCGCCCGTTGCCGCAATCACGGCGCGCGGGTCGGTCGATTTCGGCGGTGCAGCCGTGACCGCGGCCAGTGGCGAGACGGGATCGCACGGGCTTGCGGTTGTCTCCGGAGGGACCGTCAATCCGACAGGCTTGACCACCTTGGGCCCGCCGCCGTCCACCGGCCACGTGGTGGAAAACGATCCCGGCCTGTCGGACCCGCTCCTGACGCCCGAGCGCATGTTCGCGGCAAGCTTCGGCGTCTGGCCCTCGACCTATGTCGAGCAGCCGGGCGCGGTGAAGGTCGACTGCTCGGGCACTTGCGACTCGGCGGTGGTGCGCAGCGCCGTCGACGCCAACCCCGGGCGCGTCCTCGTCCTCCAAGGCGACGTGCTCCTCGACGGCGGCGCATCGATCGGTACTGCGAACGACCCGGTGGTGCTGATGGCGACCGGGAATTTCGGCTTCTCCTCGTCGACCGACGTCTACGGCCTCGTGTATTCCCGCGCATCGACCTGGGCCACTTCGGGCAGCGGCAACATCTTTGGCGCCCTGGTGGCCGAAGGGTCGATCGGCGGCACCGGCGGCTTCTCCGTCGGCTATTCGAAAGAGATCCTGGATCGCGCGCGCTGGAGCACGGGCAGCTTCGTGCTGGTGCCTGGAAGCTGGAAGGATTTCCCATGA
PROTEIN sequence
Length: 444
MILMRTPRAPRALHHRNRQHGAAALIVVMVLFFLISLVAAYSSRNIIFEQRTSANQYTSTASLEAANAGLEWALGLLNGSRIDDSCTPSSSVSTASFRERYLSVDPTSGIISVSTAVRDGPQWPGCWHDRASNQWVCHCPGSGTSSIATTPSDPFAPSFRIRFIQLDEAFTVTPAPTTRPGIVAIEVNGCTSWNSECLDFKSYTKDWCRGTVCAQLALSSGVKSPPVAAITARGSVDFGGAAVTAASGETGSHGLAVVSGGTVNPTGLTTLGPPPSTGHVVENDPGLSDPLLTPERMFAASFGVWPSTYVEQPGAVKVDCSGTCDSAVVRSAVDANPGRVLVLQGDVLLDGGASIGTANDPVVLMATGNFGFSSSTDVYGLVYSRASTWATSGSGNIFGALVAEGSIGGTGGFSVGYSKEILDRARWSTGSFVLVPGSWKDFP*