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cn_combo_scaffold_2019_14

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 12109..13236

Top 3 Functional Annotations

Value Algorithm Source
Histone deacetylase superfamily n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z414_9NEIS similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 367.0
  • Bit_score: 360
  • Evalue 2.40e-96
Histone deacetylase superfamily {ECO:0000313|EMBL:EEG08591.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 367.0
  • Bit_score: 360
  • Evalue 3.30e-96
acetoin utilization protein similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 365.0
  • Bit_score: 351
  • Evalue 2.40e-94

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Taxonomy

Pseudogulbenkiania ferrooxidans → Pseudogulbenkiania → Neisseriales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1128
ATGACAACTTCCTCGGTCGGCTTCGTCGCCGACGAACTGTGCTTCTGGCACGACCCGGGCAACTACGCGCTGGTGCTCCAGCCCGGCGGCTGGGTCGAGCCCTACAACCGCCACATCGAGAACCCGGACCCCAAGCGCCGCTTGCTGAACCTGCTGGCGACCTCGGGGCTGCTGCGCCAGCTCACCGCAATCGAAGCGCGCGACGCGACTCTGGCCGAACTCGAGCGCCTGCACCTGCCGGCCTACGTCGCGCGCGTGCAGGCCCTGGCGCGCGCGGGCGGCGGCGACACCGGCGTCGGCGCGCCGATCACCCGCAACGGCTGGGACGCCGCGCGCCGCTCGGCCGGCTGCGCGCTCGCCGCGGTGGACGCCGTGATGCAGGGCCGCGCGCAGGCCGCGTACGCGCTCACCCGCCCGCCCGGCCACCACGCCGAGCCCGACCAGGGCATGGGCTTCTGCGTCTTCGCCAACGCCGCGCTCGCCGCCGAGCATGCGATGGCGTCATTCGGCGTGAAGCGCGTGGCCATCGTCGACTGGGACGTGCACTTCGGCAACGGCACGCAGAAGTGCTTCGAGCAGCGGCGCGACGTGCTGGCGATCTCGATCCACCAGCAGGCCGGCTACCTCCAGGTCAGGGGCGAGGCCGACGAGATCGGATCGGGCGCGGGCCTGGGCTACAGCCTGAACGTGCCGCTGCCGCCGGGCTGCGGCTTCGGCGCCTACCGCGACGCCTTCGAGCGCATCGTGGTGCCCGCGCTCGATGCCTACGCGCCCGAGCTGATCATCGTCGCCTGCGGCTACGACGCCGGTCGCATGGACCCGCTGGGCCGCATGCTGCTCGACGGCGTGGCCTTCCGCGACATGACCGAGAGGGTGCAGGACGCGGCGCGCCGCCATGCCAACGGCCGGCTGGTGTTCACGCACGAGGGCGGCTACTGCCCCGTCTCGGTGCCCTTCTTCGGCCTCGCCGTGCTGGAGCGCCTGAGCGGCCGTCGCACCGACGTGGCGTGCCCGTTCACCGCCCAGCATGACCGCATCCCCGGCCAGGCCCTGCAGGACCACCAGCGCGCGCTGGTGGATGACCTGGCCGCGCGGTTCGAGGACGTCCGGCAGCGCCACTGGCCATGA
PROTEIN sequence
Length: 376
MTTSSVGFVADELCFWHDPGNYALVLQPGGWVEPYNRHIENPDPKRRLLNLLATSGLLRQLTAIEARDATLAELERLHLPAYVARVQALARAGGGDTGVGAPITRNGWDAARRSAGCALAAVDAVMQGRAQAAYALTRPPGHHAEPDQGMGFCVFANAALAAEHAMASFGVKRVAIVDWDVHFGNGTQKCFEQRRDVLAISIHQQAGYLQVRGEADEIGSGAGLGYSLNVPLPPGCGFGAYRDAFERIVVPALDAYAPELIIVACGYDAGRMDPLGRMLLDGVAFRDMTERVQDAARRHANGRLVFTHEGGYCPVSVPFFGLAVLERLSGRRTDVACPFTAQHDRIPGQALQDHQRALVDDLAARFEDVRQRHWP*