Alias: RUB134_36
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
cn_combo_scaffold_2019_1
unknown
|
Not on your lists |
1..81
|
This feature has no annotations |
|
cn_combo_scaffold_2019_2
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
78..623
|
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00035EF4F9
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
hypothetical protein
|
|
cn_combo_scaffold_2019_3
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
620..1996
|
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00035CA6E7
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
|
|
cn_combo_scaffold_2019_4
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2164..3327
|
Putative regulator of cell autolysis n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNQ0_9BURK
Putative regulator of cell autolysis {ECO:0000313|EMBL:EHR72586.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;
histidine kinase family protein
|
|
cn_combo_scaffold_2019_5
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3324..4169
|
Response regulator of the LytR/AlgR family n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNQ1_9BURK
response regulator receiver protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
response regulator LytTR
|
|
cn_combo_scaffold_2019_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4243..4824)
|
MarR family transcriptional regulator n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2KF09_9BURK
Variovorax paradoxus strain MEDvA23 contig_19, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33822.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
MarR family transcriptional regulator
|
|
cn_combo_scaffold_2019_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4853..6283
|
aldehyde dehydrogenase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F75D
Aldehyde Dehydrogenase {ECO:0000313|EMBL:KFC72223.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
aldehyde dehydrogenase
|
|
cn_combo_scaffold_2019_8
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6307..7671
|
Putative aminotransferase n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6BE81_PSERE
putative aminotransferase
Putative aminotransferase {ECO:0000313|EMBL:BAN47379.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas res
|
|
cn_combo_scaffold_2019_9
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7685..8464
|
ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, ATPase component-like protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAN2_9RHOB
ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, ATPase component-like protein {ECO:0000313|EMBL:EAQ14973.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhod
ABC transporter ATP-binding protein
|
|
cn_combo_scaffold_2019_10
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8490..9479
|
ABC taurine transporter, periplasmic ligand binding protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAN1_9RHOB
ABC taurine transporter, periplasmic ligand binding protein {ECO:0000313|EMBL:EAQ14972.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Marit
hypothetical protein
|
|
cn_combo_scaffold_2019_11
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9514..10476
|
ABC taurine transporter, periplasmic ligand binding protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAN1_9RHOB
ABC taurine transporter, periplasmic ligand binding protein {ECO:0000313|EMBL:EAQ14972.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Marit
hypothetical protein
|
|
cn_combo_scaffold_2019_12
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10473..11318
|
Putative taurine ABC transport system permease protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAN0_9RHOB
Putative taurine ABC transport system permease protein {ECO:0000313|EMBL:EAQ14971.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimiba
ABC transporter membrane protein
|
|
cn_combo_scaffold_2019_13
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11333..12094
|
Putative ABC transporter membrane protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAM9_9RHOB
Putative ABC transporter membrane protein {ECO:0000313|EMBL:EAQ14970.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" sourc
ABC transporter permease
|
|
cn_combo_scaffold_2019_14
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12109..13236
|
Histone deacetylase superfamily n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z414_9NEIS
Histone deacetylase superfamily {ECO:0000313|EMBL:EEG08591.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseud
acetoin utilization protein
|
|
cn_combo_scaffold_2019_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13332..14627
|
N-acetylgalactosamine-6-sulfatase (EC:3.1.6.4) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
twin-arginine translocation pathway signal protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003707500
sulfatase
|
|
cn_combo_scaffold_2019_16
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14695..15885)
|
PGAP1-like protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IPL0_ANADE
PGAP1-like
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
|
|
cn_combo_scaffold_2019_17
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15917..16702)
|
cAMP phosphodiesterase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LSM4_9BURK
cAMP phosphodiesterase {ECO:0000313|EMBL:EGJ11342.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC B
putative hydrolase
|
|
cn_combo_scaffold_2019_18
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16933..17580)
|
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LSM5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11343.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC
FHA domain-containing protein
rbh
|
|
cn_combo_scaffold_2019_19
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17692..18552)
|
putative protein phosphatase 2C-type (EC:3.1.3.16)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HY96_RUBGI
Uncharacterized protein {ECO:0000313|EMBL:BAL97983.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 10
|
|
cn_combo_scaffold_2019_20
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18596..19426)
|
Putative serine/threonine protein kinase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LSM7_9BURK
Putative serine/threonine protein kinase {ECO:0000313|EMBL:EGJ11345.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatily
putative serine/threonine protein kinase
|
|
cn_combo_scaffold_2019_21
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19471..20679)
|
Integral membrane protein TerC n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYS1_VARPE
integral membrane protein terc Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
integral membrane protein terc
|
|
cn_combo_scaffold_2019_22
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20711..21604)
|
sucD; succinyl-CoA ligase[ADP-forming] subunit alpha SucD (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNI7_RUBGI
|
|
cn_combo_scaffold_2019_23
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21621..22781)
|
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
sucC; succinyl-CoA ligase[ADP-forming] subunit bata SucC (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LSN2_9BURK
|
|
cn_combo_scaffold_2019_24
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22979..23503)
|
Regulatory protein RecX n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HYA5_RUBGI
recX; recombination regulator RecX
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rub
|
|
cn_combo_scaffold_2019_25
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23527..24576)
|
Protein RecA n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LSN5_9BURK
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=987059 species="Bacteria; Proteobac
recA; protein RecA
|
|
cn_combo_scaffold_2019_26
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24781..25452
|
Two component transcriptional regulator n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LSN6_9BURK
Two component transcriptional regulator {ECO:0000313|EMBL:EGJ11354.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyt
winged helix family two component transcriptional regulator
|
|
cn_combo_scaffold_2019_27
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25524..26978
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" sourc
OmpR family two component system sensor histidine kinase (EC:2.7.13.3)
Putative transmembrane sensor histidine kinase transcription regulator protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LSN7_9BURK
|
|
cn_combo_scaffold_2019_28
unknown
|
Not on your lists |
comp(26995..27069)
|
This feature has no annotations |