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scnpilot_expt_750_p_scaffold_299_curated

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_299_curated_1
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32..844)
DNA (813bp) protein (271aa)
Flagellin, C-terminal:Flagellin, N-terminal n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HZ1_DECAR
flagellin, C-terminal:flagellin, N-terminal; K02406 flagellin
flagellin, C-terminal:flagellin, N-terminal; K02406 flagellin
flagellin, C-terminal:flagellin, N-terminal; K02406 flagellin
scnpilot_expt_750_p_scaffold_299_curated_2
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1129..3519
DNA (2391bp) protein (797aa)
TPR repeat n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HZ0_DECAR
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_299_curated_3
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3525..4343)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J3D2A1_9BURK
Tax=RBG_16_Gallionellales_57_15_curated
scnpilot_expt_750_p_scaffold_299_curated_4
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4343..6955)
DNA (2613bp) protein (871aa)
Uncharacterized protein (Fragment) n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1AT41_9NEIS
Uncharacterized protein {ECO:0000313|EMBL:ERE20035.1}; Flags: Fragment;; TaxID=1388764 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans EGD-HP2.;"
glycosyl transferase family protein
glycosyl transferase family protein
scnpilot_expt_750_p_scaffold_299_curated_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7081..8226)
DNA (1146bp) protein (382aa)
Putative methyltransferase n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SZF9_9GAMM
methyltransferase
methyltransferase
methyltransferase
scnpilot_expt_750_p_scaffold_299_curated_6
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8330..9373)
DNA (1044bp) protein (348aa)
Radical SAM domain protein n=1 Tax=Selenomonas sp. oral taxon 137 str. F0430 RepID=E4LHK2_9FIRM
Radical SAM domain protein
Radical SAM domain protein
Radical SAM domain protein
scnpilot_expt_750_p_scaffold_299_curated_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9370..10434)
DNA (1065bp) protein (355aa)
Putative coenzyme PQQ synthesis protein E n=1 Tax=Selenomonas sp. oral taxon 137 str. F0430 RepID=E4LHK1_9FIRM
radical SAM protein
radical SAM protein
radical SAM protein
scnpilot_expt_750_p_scaffold_299_curated_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10486..11592)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI00037A496E
FkbM family methyltransferase
FkbM family methyltransferase
FkbM family methyltransferase
scnpilot_expt_750_p_scaffold_299_curated_9
Pseudomonas sp. SHC52, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11769..13550)
DNA (1782bp) protein (594aa)
Acetolactate synthase large subunit {ECO:0000313|EMBL:CDF92475.1}; EC=2.2.1.6 {ECO:0000313|EMBL:CDF92475.1};; TaxID=984195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. SHC52.;"
Thiamine pyrophosphate binding domain-containing protein (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Thiamine pyrophosphate binding domain-containing protein (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Thiamine pyrophosphate binding domain-containing protein (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
scnpilot_expt_750_p_scaffold_299_curated_10
Pseudomonas sp. SHC52, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13581..15485)
DNA (1905bp) protein (635aa)
N-acetylneuraminate synthase {ECO:0000313|EMBL:CDF92474.1}; EC=2.5.1.56 {ECO:0000313|EMBL:CDF92474.1};; TaxID=984195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. SHC52.;"
N-acetyl neuramic acid synthetase NeuB (EC:2.5.1.56 2.5.1.57); K01654 N-acetylneuraminate synthase [EC:2.5.1.56]
N-acetyl neuramic acid synthetase NeuB (EC:2.5.1.56 2.5.1.57); K01654 N-acetylneuraminate synthase [EC:2.5.1.56]
N-acetyl neuramic acid synthetase NeuB (EC:2.5.1.56 2.5.1.57); K01654 N-acetylneuraminate synthase [EC:2.5.1.56]
scnpilot_expt_750_p_scaffold_299_curated_11
R_Gammaproteobacteria_60_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15482..16846)
DNA (1365bp) protein (455aa)
Putative sugar kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
Putative sugar kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
Putative sugar kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
sugar kinase n=1 Tax=Pseudomonas mendocina RepID=UPI00036A2EB6
scnpilot_expt_750_p_scaffold_299_curated_12
R_Gammaproteobacteria_60_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16834..17526)
DNA (693bp) protein (231aa)
HAD superfamily hydrolase (EC:2.7.7.13); K15669 D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71]
HAD superfamily hydrolase (EC:2.7.7.13); K15669 D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71]
HAD superfamily hydrolase (EC:2.7.7.13); K15669 D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71]
hypothetical protein n=1 Tax=Pseudomonas putida RepID=UPI0002E21DC3
scnpilot_expt_750_p_scaffold_299_curated_13
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17692..18732)
DNA (1041bp) protein (347aa)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:AKE65279.1}; EC=4.2.1.46 {ECO:0000313|EMBL:AKE65279.1};; TaxID=1641812 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa NIES-2549.;"
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
scnpilot_expt_750_p_scaffold_299_curated_14
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18733..20043)
DNA (1311bp) protein (437aa)
lipopolysaccharide biosynthesis protein n=1 Tax=Aliivibrio logei RepID=UPI000300F0E6
lipopolysaccharide biosynthesis protein
lipopolysaccharide biosynthesis protein
lipopolysaccharide biosynthesis protein
scnpilot_expt_750_p_scaffold_299_curated_15
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20040..21113)
DNA (1074bp) protein (358aa)
CDP-glucose 4,6-dehydratase; K01709 CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
CDP-glucose 4,6-dehydratase; K01709 CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
CDP-glucose 4,6-dehydratase; K01709 CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037468B4
scnpilot_expt_750_p_scaffold_299_curated_16
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21098..21802)
DNA (705bp) protein (235aa)
ddhA; glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33); K00978 glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] rbh
ddhA; glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33); K00978 glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] rbh
ddhA; glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33); K00978 glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] rbh
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:AAQ61554.1}; EC=2.7.7.33 {ECO:0000313|EMBL:AAQ61554.1};; TaxID=243365 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /; NBRC 12614 / NCIMB 9131 / NCTC 9757).;"
scnpilot_expt_750_p_scaffold_299_curated_17
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22029..22688)
DNA (660bp) protein (220aa)
haloacid dehalogenase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
haloacid dehalogenase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
haloacid dehalogenase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
Haloacid dehalogenase n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z214_9RHOO
scnpilot_expt_750_p_scaffold_299_curated_18
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22760..24574)
DNA (1815bp) protein (605aa)
Diguanylate cyclase YdeH {ECO:0000313|EMBL:KFB66978.1}; EC=2.7.7.65 {ECO:0000313|EMBL:KFB66978.1};; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
Diguanylate cyclase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJK2_ACCPU
diguanylate cyclase; K13590 diguanylate cyclase
diguanylate cyclase; K13590 diguanylate cyclase
scnpilot_expt_750_p_scaffold_299_curated_19
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24798..25295
DNA (498bp) protein (166aa)
Low molecular weight protein-tyrosine-phosphatase YfkJ {ECO:0000313|EMBL:EXI68826.1}; EC=3.1.3.48 {ECO:0000313|EMBL:EXI68826.1};; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
scnpilot_expt_750_p_scaffold_299_curated_20
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25292..27490)
DNA (2199bp) protein (733aa)
hypothetical protein n=1 Tax=Leeia oryzae RepID=UPI000367E71D
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_expt_750_p_scaffold_299_curated_21
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27558..29771)
DNA (2214bp) protein (738aa)
Histidine kinase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTW8_ACCPU
histidine kinase
histidine kinase
histidine kinase
scnpilot_expt_750_p_scaffold_299_curated_22
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30076..30864)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTX0_ACCPU
Outer membrane lipoprotein-sorting protein {ECO:0000313|EMBL:KFB76418.1}; Flags: Precursor;; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_299_curated_23
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30919..31683
DNA (765bp) protein (255aa)
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-]
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-]
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-]
ABC transporter related n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTX1_ACCPU
scnpilot_expt_750_p_scaffold_299_curated_24
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31701..33221
DNA (1521bp) protein (507aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DF3_DECAR
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_299_curated_25
unknown

Not on your lists

33450..34235
DNA (786bp) protein (262aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_299_curated_26
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34404..35477)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NXK0_AROAE
moeY; molybdopterin biosynthesis protein MoeY
moeY; molybdopterin biosynthesis protein MoeY
moeY; molybdopterin biosynthesis protein MoeY
scnpilot_expt_750_p_scaffold_299_curated_27

Not on your lists

comp(35482..36384)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EH48_9BACT
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_299_curated_28
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36459..37688
DNA (1230bp) protein (410aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2G447_9BACT
hypothetical protein; K02004 putative ABC transport system permease protein
hypothetical protein; K02004 putative ABC transport system permease protein
hypothetical protein; K02004 putative ABC transport system permease protein
scnpilot_expt_750_p_scaffold_299_curated_29
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37685..38917
DNA (1233bp) protein (411aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2F412_9BACT
ABC transporter permease YtrF {ECO:0000313|EMBL:EXI90754.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
hypothetical protein; K02004 putative ABC transport system permease protein
hypothetical protein; K02004 putative ABC transport system permease protein
scnpilot_expt_750_p_scaffold_299_curated_30
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38856..39749)
DNA (894bp) protein (298aa)
Possible long-chain N-acyl amino acid synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ92_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO50548.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
long-chain N-acyl amino acid synthase
long-chain N-acyl amino acid synthase
Displaying items 1-30 of 84 in total

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