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scnpilot_expt_750_p_scaffold_192_curated

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Displaying items 1-30 of 153 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_192_curated_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..332)
DNA (330bp) protein (110aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RVW8_COMTE
Putative uncharacterized protein {ECO:0000313|EMBL:EHN63315.1}; Flags: Fragment;; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
filamentous hemagglutinin outer membrane protein
filamentous hemagglutinin outer membrane protein
scnpilot_expt_750_p_scaffold_192_curated_2
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(356..2104)
DNA (1749bp) protein (583aa)
OMP85 family outer membrane protein n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RVW9_COMTE
OMP85 family outer membrane protein {ECO:0000313|EMBL:EHN63316.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
OMP85 family outer membrane protein
OMP85 family outer membrane protein
scnpilot_expt_750_p_scaffold_192_curated_3
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2704..3645
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6XHE3_9RHOO
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_192_curated_4
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3700..4908)
DNA (1209bp) protein (403aa)
Major facilitator superfamily MFS_1 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5L3_ACIDE
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EER60218.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
major facilitator superfamily transporter
major facilitator superfamily transporter
scnpilot_expt_750_p_scaffold_192_curated_5
Pseudomonas sp. G5(2012), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4987..5835)
DNA (849bp) protein (283aa)
S-formylglutathione hydrolase {ECO:0000313|EMBL:EPA98497.1}; EC=3.1.2.12 {ECO:0000313|EMBL:EPA98497.1};; TaxID=1268068 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G5(2012).;"
S-formylglutathione hydrolase n=1 Tax=Pseudomonas sp. G5(2012) RepID=S2FUQ4_9PSED
S-formylglutathione hydrolase
S-formylglutathione hydrolase
scnpilot_expt_750_p_scaffold_192_curated_6
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5852..6976)
DNA (1125bp) protein (375aa)
fdhG; FdhG (EC:1.1.1.1); K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
fdhG; FdhG (EC:1.1.1.1); K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
fdhG; FdhG (EC:1.1.1.1); K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=557598 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter hongkongensis (strain HLHK9).;"
scnpilot_expt_750_p_scaffold_192_curated_7
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7348..7677
DNA (330bp) protein (110aa)
Transport-associated n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FQ34_PHAMO
transport-associated protein
transport-associated protein
transport-associated protein
scnpilot_expt_750_p_scaffold_192_curated_8
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7761..8597
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00037B82A1
type 11 methyltransferase
type 11 methyltransferase
type 11 methyltransferase
scnpilot_expt_750_p_scaffold_192_curated_9
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8884..9411
DNA (528bp) protein (176aa)
Lipocalin-related protein and Bos/Can/Equ allergen n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EV3_DECAR
Lipocalin-related protein and Bos/Can/Equ allergen {ECO:0000313|EMBL:BAO27984.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Lipocalin-related protein and Bos/Can/Equ allergen; K03098 outer membrane lipoprotein Blc
Lipocalin-related protein and Bos/Can/Equ allergen; K03098 outer membrane lipoprotein Blc
scnpilot_expt_750_p_scaffold_192_curated_10
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9581..11785
DNA (2205bp) protein (735aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Signal transduction histidine kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220A9_RHOFD
signal transduction histidine kinase
signal transduction histidine kinase
scnpilot_expt_750_p_scaffold_192_curated_11
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11874..12194)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q0P9_9RHOO
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_192_curated_12
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12447..13088)
DNA (642bp) protein (214aa)
LuxR family transcriptional regulator n=1 Tax=Thauera sp. 63 RepID=N6XKQ6_9RHOO
LuxR family transcriptional regulator; K02479 two-component system, NarL family, response regulator
LuxR family transcriptional regulator; K02479 two-component system, NarL family, response regulator
LuxR family transcriptional regulator; K02479 two-component system, NarL family, response regulator
scnpilot_expt_750_p_scaffold_192_curated_13
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13133..16408)
DNA (3276bp) protein (1092aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylomonas methanica (strain MC09) RepID=F9ZVN1_METMM
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:BAO28208.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_expt_750_p_scaffold_192_curated_14
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16398..18806)
DNA (2409bp) protein (803aa)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
DNA topoisomerase IV subunit A; K02621 topoisomerase IV subunit A [EC:5.99.1.-]
DNA topoisomerase IV subunit A; K02621 topoisomerase IV subunit A [EC:5.99.1.-]
DNA topoisomerase IV subunit A; K02621 topoisomerase IV subunit A [EC:5.99.1.-]
scnpilot_expt_750_p_scaffold_192_curated_15
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18810..20759)
DNA (1950bp) protein (650aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
DNA topoisomerase IV subunit B (EC:5.99.1.3); K02622 topoisomerase IV subunit B [EC:5.99.1.-]
DNA topoisomerase IV subunit B (EC:5.99.1.3); K02622 topoisomerase IV subunit B [EC:5.99.1.-]
DNA topoisomerase IV subunit B (EC:5.99.1.3); K02622 topoisomerase IV subunit B [EC:5.99.1.-]
scnpilot_expt_750_p_scaffold_192_curated_16
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20818..21297)
DNA (480bp) protein (160aa)
CreA family protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMJ0_ACCPU
CreA family protein; K05805 CreA protein
CreA family protein; K05805 CreA protein
CreA family protein; K05805 CreA protein
scnpilot_expt_750_p_scaffold_192_curated_17
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21333..22676)
DNA (1344bp) protein (448aa)
Periplasmic copper-binding n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMA4_ACCPU
periplasmic copper-binding protein; K07218 nitrous oxidase accessory protein
periplasmic copper-binding protein; K07218 nitrous oxidase accessory protein
periplasmic copper-binding protein; K07218 nitrous oxidase accessory protein
scnpilot_expt_750_p_scaffold_192_curated_18
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22649..23368)
DNA (720bp) protein (240aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:ACV37181.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ACV37181.1};; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
scnpilot_expt_750_p_scaffold_192_curated_19
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23487..23960)
DNA (474bp) protein (158aa)
Ribonuclease H (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4]
Ribonuclease H (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4]
Ribonuclease H (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4]
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
scnpilot_expt_750_p_scaffold_192_curated_20
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23947..24711)
DNA (765bp) protein (255aa)
methyltransferase type 11 n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI0003762CF2
Biotin biosynthesis protein BioC {ECO:0000313|EMBL:KFB70650.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
type 11 methyltransferase
type 11 methyltransferase
scnpilot_expt_750_p_scaffold_192_curated_21
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24739..25563
DNA (825bp) protein (275aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
hydroxyacylglutathione hydrolase (EC:3.1.2.6); K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6]
hydroxyacylglutathione hydrolase (EC:3.1.2.6); K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6]
hydroxyacylglutathione hydrolase (EC:3.1.2.6); K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6]
scnpilot_expt_750_p_scaffold_192_curated_22
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25851..26243)
DNA (393bp) protein (131aa)
Response regulator receiver protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RM99_ACCPU
response regulator receiver protein; K03413 two-component system, chemotaxis family, response regulator CheY
response regulator receiver protein; K03413 two-component system, chemotaxis family, response regulator CheY
response regulator receiver protein; K03413 two-component system, chemotaxis family, response regulator CheY
scnpilot_expt_750_p_scaffold_192_curated_23
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26258..27214)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000373D842
diguanylate cyclase domain-containing protein
diguanylate cyclase domain-containing protein
diguanylate cyclase domain-containing protein
scnpilot_expt_750_p_scaffold_192_curated_24
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27382..30813
DNA (3432bp) protein (1144aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RM98_ACCPU
Uncharacterized protein {ECO:0000313|EMBL:KFB69004.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_192_curated_25
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30869..32230
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RM97_ACCPU
RmuC family protein {ECO:0000313|EMBL:EXI80924.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein; K09760 DNA recombination protein RmuC
hypothetical protein; K09760 DNA recombination protein RmuC
scnpilot_expt_750_p_scaffold_192_curated_26
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32227..32658
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain K90mix) RepID=D3SEJ8_THISK
Uncharacterized protein {ECO:0000313|EMBL:KFB70646.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_192_curated_27
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32725..35130
DNA (2406bp) protein (802aa)
Serine/threonine-protein kinase PrkC {ECO:0000313|EMBL:KFB70645.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KFB70645.1};; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
Serine/threonine protein kinase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RM96_ACCPU
serine/threonine protein kinase
serine/threonine protein kinase
scnpilot_expt_750_p_scaffold_192_curated_28
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35198..35992)
DNA (795bp) protein (265aa)
Outer membrane protein assembly factor BamD n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RM95_ACCPU
outer membrane assembly lipoprotein YfiO; K05807 putative lipoprotein
outer membrane assembly lipoprotein YfiO; K05807 putative lipoprotein
outer membrane assembly lipoprotein YfiO; K05807 putative lipoprotein
scnpilot_expt_750_p_scaffold_192_curated_29
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35994..37109
DNA (1116bp) protein (372aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
RluA family pseudouridine synthase (EC:3.2.1.17); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
RluA family pseudouridine synthase (EC:3.2.1.17); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
RluA family pseudouridine synthase (EC:3.2.1.17); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
scnpilot_expt_750_p_scaffold_192_curated_30
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37087..37872
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000365AF14
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
hypothetical protein; K05810 conserved hypothetical protein rbh
hypothetical protein; K05810 conserved hypothetical protein rbh
Displaying items 1-30 of 153 in total

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