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scnpilot_expt_750_p_scaffold_104_curated

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Displaying items 1-30 of 194 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_104_curated_1
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(320..1030)
DNA (711bp) protein (237aa)
Two-component transcriptional regulator, winged helix family n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4A2_9PROT
Putative two-component transcriptional regulator, winged helix family {ECO:0000313|EMBL:CDK99656.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
response regulator
response regulator
scnpilot_expt_750_p_scaffold_104_curated_2
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1042..2970)
DNA (1929bp) protein (643aa)
Putative two component sensor kinase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F299_9PROT
Putative two component sensor kinase {ECO:0000313|EMBL:CDK99655.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
periplasmic sensor signal transduction histidine kinase
periplasmic sensor signal transduction histidine kinase
scnpilot_expt_750_p_scaffold_104_curated_3
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3420..4949
DNA (1530bp) protein (510aa)
Membrane-bound lytic murein transglycosylase F {ECO:0000256|SAAS:SAAS00176609}; EC=4.-.-.- {ECO:0000256|SAAS:SAAS00276317};; EC=4.2.2.- {ECO:0000256|SAAS:SAAS00276308};; EC=4.2.2.n1 {ECO:0000256|SAAS:SAAS00166192};; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Putative soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFL7_AZOSU
putative soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein
putative soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein
scnpilot_expt_750_p_scaffold_104_curated_4
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4913..6196)
DNA (1284bp) protein (428aa)
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11]
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11]
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11]
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11]
scnpilot_expt_750_p_scaffold_104_curated_5
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6199..7524)
DNA (1326bp) protein (442aa)
AAA ATPase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFL4_AZOSU
Replication-associated recombination protein A {ECO:0000313|EMBL:KFB75473.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
AAA ATPase; K07478 putative ATPase
AAA ATPase; K07478 putative ATPase
scnpilot_expt_750_p_scaffold_104_curated_6
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7531..8142)
DNA (612bp) protein (204aa)
Outer-membrane lipoprotein carrier protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RQ01_ACCPU
outer membrane lipoprotein carrier protein LolA; K03634 outer membrane lipoprotein carrier protein
outer membrane lipoprotein carrier protein LolA; K03634 outer membrane lipoprotein carrier protein
outer membrane lipoprotein carrier protein LolA; K03634 outer membrane lipoprotein carrier protein
scnpilot_expt_750_p_scaffold_104_curated_7
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8142..10454)
DNA (2313bp) protein (771aa)
DNA segregation ATPase, FtsK/SpoIIIE family n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFL2_AZOSU
DNA translocase FtsK {ECO:0000313|EMBL:EXI90307.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
DNA segregation ATPase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
DNA segregation ATPase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
scnpilot_expt_750_p_scaffold_104_curated_8
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10540..11214)
DNA (675bp) protein (225aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RQ03_ACCPU
Crp/Fnr family transcriptional regulator; K10914 CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Crp/Fnr family transcriptional regulator; K10914 CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Crp/Fnr family transcriptional regulator; K10914 CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
scnpilot_expt_750_p_scaffold_104_curated_9
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11366..12325
DNA (960bp) protein (320aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
scnpilot_expt_750_p_scaffold_104_curated_10
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12389..12970
DNA (582bp) protein (194aa)
Putative DNA endonuclease SmrA {ECO:0000313|EMBL:KFB69235.1}; EC=3.1.-.- {ECO:0000313|EMBL:KFB69235.1};; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
Smr protein/MutS2 n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RQ05_ACCPU
Smr protein/MutS2
Smr protein/MutS2
scnpilot_expt_750_p_scaffold_104_curated_11
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13300..14622
DNA (1323bp) protein (441aa)
Sodium:dicarboxylate symporter n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SU1_RHOFD
sodium:dicarboxylate symporter
sodium:dicarboxylate symporter
sodium:dicarboxylate symporter
scnpilot_expt_750_p_scaffold_104_curated_12
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14664..15560
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI000365B5A2
gltI; glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein
gltI; glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein
gltI; glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein
scnpilot_expt_750_p_scaffold_104_curated_13
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15680..16018)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein PII n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFK8_AZOSU
nitrogen regulatory protein PII; K04751 nitrogen regulatory protein P-II 1
nitrogen regulatory protein PII; K04751 nitrogen regulatory protein P-II 1
nitrogen regulatory protein PII; K04751 nitrogen regulatory protein P-II 1
scnpilot_expt_750_p_scaffold_104_curated_14
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16086..17696)
DNA (1611bp) protein (537aa)
NAD synthetase (EC:6.3.5.1); K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
NAD synthetase (EC:6.3.5.1); K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
NAD synthetase (EC:6.3.5.1); K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
NAD synthetase (EC:6.3.5.1); K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
scnpilot_expt_750_p_scaffold_104_curated_15
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17789..18337)
DNA (549bp) protein (183aa)
Inorganic diphosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1]
Inorganic diphosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1]
Inorganic diphosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1]
Inorganic diphosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1]
scnpilot_expt_750_p_scaffold_104_curated_16
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18496..18672
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47H08_DECAR
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_104_curated_17
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19006..21261
DNA (2256bp) protein (752aa)
TonB-dependent heme/hemoglobin receptor family protein/TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFK1_AZOSU
TonB-dependent heme/hemoglobin receptor family protein/TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; K02014 iron complex outermembrane recepter protein
TonB-dependent heme/hemoglobin receptor family protein/TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; K02014 iron complex outermembrane recepter protein
TonB-dependent heme/hemoglobin receptor family protein/TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; K02014 iron complex outermembrane recepter protein
scnpilot_expt_750_p_scaffold_104_curated_18
unknown

Not on your lists

21325..21609
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_104_curated_19
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21639..25622
DNA (3984bp) protein (1328aa)
Mg chelatase, cobalamin biosynthesis protein CobN; K02230 cobaltochelatase CobN [EC:6.6.1.2]
Mg chelatase, cobalamin biosynthesis protein CobN; K02230 cobaltochelatase CobN [EC:6.6.1.2]
Mg chelatase, cobalamin biosynthesis protein CobN; K02230 cobaltochelatase CobN [EC:6.6.1.2]
Mg chelatase, cobalamin biosynthesis protein CobN; K02230 cobaltochelatase CobN [EC:6.6.1.2]
scnpilot_expt_750_p_scaffold_104_curated_20
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25619..27886
DNA (2268bp) protein (756aa)
TonB-dependent receptor n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SCN4_GALCS
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
scnpilot_expt_750_p_scaffold_104_curated_21
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27955..28476
DNA (522bp) protein (174aa)
Biopolymer transport protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFJ7_AZOSU
biopolymer transport protein
biopolymer transport protein
biopolymer transport protein
scnpilot_expt_750_p_scaffold_104_curated_22
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28473..28826
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFJ6_AZOSU
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_104_curated_23
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28823..29770
DNA (948bp) protein (316aa)
Putative uncharacterized protein phuW n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QPC4_METS6
phuW; hypothetical protein
phuW; hypothetical protein
phuW; hypothetical protein
scnpilot_expt_750_p_scaffold_104_curated_24
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


29791..30402
DNA (612bp) protein (204aa)
30S ribosomal protein S4 n=1 Tax=Thauera sp. 28 RepID=N6YDG3_9RHOO
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
scnpilot_expt_750_p_scaffold_104_curated_25
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30821..31027
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKV2_ACCPU
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_104_curated_26
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31037..31618
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YWJ3_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO84319.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_expt_750_p_scaffold_104_curated_27
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31615..32502
DNA (888bp) protein (296aa)
Iron dicitrate transporter FecR n=18 Tax=Pseudomonas RepID=R9ZAR0_PSEAI
iron dicitrate transporter FecR
iron dicitrate transporter FecR
iron dicitrate transporter FecR
scnpilot_expt_750_p_scaffold_104_curated_28
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32675..35101
DNA (2427bp) protein (809aa)
TonB-dependent ferric siderophore receptor n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SYI6_JANMA
brfB; TonB-dependent ferric siderophore receptor; K02014 iron complex outermembrane recepter protein
brfB; TonB-dependent ferric siderophore receptor; K02014 iron complex outermembrane recepter protein
brfB; TonB-dependent ferric siderophore receptor; K02014 iron complex outermembrane recepter protein
scnpilot_expt_750_p_scaffold_104_curated_29
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35175..36458
DNA (1284bp) protein (428aa)
Uncharacterized protein n=2 Tax=Herminiimonas arsenicoxydans RepID=A4G4V4_HERAR
Uncharacterized protein {ECO:0000313|EMBL:CAL61541.2}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_104_curated_30
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36442..37329)
DNA (888bp) protein (296aa)
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFT4_AZOSU
DMT(drug/metabolite transporter) superfamily permease
DMT(drug/metabolite transporter) superfamily permease
DMT(drug/metabolite transporter) superfamily permease
Displaying items 1-30 of 194 in total

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