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scnpilot_expt_750_p_scaffold_3093_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_3093_curated_1
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..945)
DNA (945bp) protein (315aa)
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
scnpilot_expt_750_p_scaffold_3093_curated_2
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1028..5308)
DNA (4281bp) protein (1427aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
scnpilot_expt_750_p_scaffold_3093_curated_3
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5588..5959)
DNA (372bp) protein (124aa)
50S ribosomal protein L7/L12 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNY6_AZOSU
50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
scnpilot_expt_750_p_scaffold_3093_curated_4
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6011..6508)
DNA (498bp) protein (166aa)
50S ribosomal protein L10 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNY7_AZOSU
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
scnpilot_expt_750_p_scaffold_3093_curated_5
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6789..7478)
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNY8_AZOSU
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
scnpilot_expt_750_p_scaffold_3093_curated_6
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7480..7911)
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Uliginosibacterium gangwonense RepID=UPI0003667FF6
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
scnpilot_expt_750_p_scaffold_3093_curated_7
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8036..8569)
DNA (534bp) protein (178aa)
Transcription termination/antitermination protein NusG n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJS3_ACCPU
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG
nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG
scnpilot_expt_750_p_scaffold_3093_curated_8
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8566..8919)
DNA (354bp) protein (118aa)
Protein translocase subunit SecE n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJS4_ACCPU
secE; preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
secE; preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
secE; preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
Displaying 8 items

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