name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_300_bf_scaffold_200_curated_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..949)
|
YhdH/YhfP family quinone oxidoreductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036BB4DA
YhdH/YhfP family quinone oxidoreductase {ECO:0000313|EMBL:GAD22318.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
quinone oxidoreductase, yhdh/yhfp family
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(965..2176)
|
UPI0003A59147 related cluster n=1 Tax=unknown RepID=UPI0003A59147
Formyl-CoA transferase {ECO:0000313|EMBL:GAD22317.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
l-carnitine dehydratase/bile acid-inducible protein f
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2398..3141
|
Regulatory protein IclR n=2 Tax=Alicycliphilus denitrificans RepID=E8TYN3_ALIDB
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AEB86974.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3154..4308
|
acyl-CoA dehydrogenase; K06446 acyl-CoA dehydrogenase [EC:1.3.99.-]
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEB86973.1}; EC=1.3.8.1 {ECO:0000313|EMBL:AEB86973.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Acyl-CoA dehydrogenase domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TYN2_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4499..5470
|
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBQ1_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB86972.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5472..6566
|
2-nitropropane dioxygenase NPD n=2 Tax=Alicycliphilus denitrificans RepID=E8TYN0_ALIDB
2-nitropropane dioxygenase NPD
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:AEB86971.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6646..8199)
|
Diguanylate cyclase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQS6_ALIDB
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ADU99050.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8375..8842
|
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TYM8_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB86968.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8846..10228)
|
Ferric reductase domain protein transmembrane component domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TYM1_ALIDB
ferric reductase domain-containing protein transmembrane component domain-containing protein
Ferric reductase domain protein transmembrane component domain protein {ECO:0000313|EMBL:ADV02030.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10262..10582)
|
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TYM0_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO21106.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10714..11031
|
Propeptide PepSY amd peptidase M4 n=2 Tax=Alicycliphilus denitrificans RepID=E8TYL9_ALIDB
Propeptide PepSY amd peptidase M4
Propeptide PepSY amd peptidase M4 {ECO:0000313|EMBL:ADV02028.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11031..11702
|
Response regulator receiver n=2 Tax=Alicycliphilus denitrificans RepID=E8TYL8_ALIDB
response regulator receiver; K02483 two-component system, OmpR family, response regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEB86958.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11699..13063
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
ATP-binding region ATPase domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TYL7_ALIDB
ATP-binding region atpase domain protein
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_14
unknown
|
Not on your lists |
13127..13240
|
This feature has no annotations |
|
SCNpilot_expt_300_bf_scaffold_200_curated_15
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13252..14127
|
prophage antirepressor id=12550124 bin=BDI species=Cellvibrio sp. BR genus=Cellvibrio taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
prophage antirepressor
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_16
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14173..14787)
|
Lysine exporter protein (LYSE/YGGA) n=2 Tax=Alicycliphilus denitrificans RepID=E8TYL6_ALIDB
lysine exporter protein (lyse/ygga)
Lysine exporter protein LysE/YggA {ECO:0000313|EMBL:GAO21102.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_17
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14918..15625
|
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:AEB86955.1}; EC=2.5.1.9 {ECO:0000313|EMBL:AEB86955.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Riboflavin synthase, alpha subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBN4_ALIDK
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15872..17431
|
Acetate--CoA ligase {ECO:0000313|EMBL:AEB86954.1}; EC=6.2.1.1 {ECO:0000313|EMBL:AEB86954.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Acetate--CoA ligase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBN3_ALIDK
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17474..18613
|
acyl dehydratase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035FCBBF
Uncharacterized protein {ECO:0000313|EMBL:GAD22308.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18619..19812
|
formyl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase {ECO:0000313|EMBL:AEB86952.1}; EC=2.8.3.16 {ECO:0000313|EMBL:AEB86952.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
L-carnitine dehydratase/bile acid-inducible protein F n=2 Tax=Alicycliphilus denitrificans RepID=E8TXY8_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_21
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19848..20825
|
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXY7_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB86951.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20860..21738)
|
Transcriptional regulator, IclR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBM9_ALIDK
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AEB86950.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21788..22216)
|
Phenylacetic acid degradation-related protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBM8_ALIDK
phenylacetic acid degradation-like protein
Phenylacetic acid degradation-related protein {ECO:0000313|EMBL:AEB86949.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_24
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22473..24590)
|
TonB-dependent copper receptor n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXY4_ALIDB
tonb-dependent copper receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent copper receptor {ECO:0000313|EMBL:GAO25614.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_25
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24700..25083)
|
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GB09_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB86947.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_26
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25195..27264)
|
UPI0003D3D84F related cluster n=1 Tax=unknown RepID=UPI0003D3D84F
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:GAD22300.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ligand-gated channel protein
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_27
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27335..27877
|
NUDIX hydrolase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GB08_ALIDK
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEB86946.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27904..28338)
|
Thioesterase superfamily protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXY1_ALIDB
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ADV02014.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28335..28547)
|
Biotin/lipoyl attachment domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXY0_ALIDB
biotin/lipoyl attachment domain-containing protein
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:AEB86944.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_200_curated_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28561..29928)
|
biotin carboxylase (EC:6.3.4.14); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
Biotin carboxylase {ECO:0000313|EMBL:ADV02012.1}; EC=6.3.4.14 {ECO:0000313|EMBL:ADV02012.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Biotin carboxylase n=2 Tax=Alicycliphilus denitrificans RepID=E8TXX9_ALIDB
|