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SCNpilot_cont_1000_p_scaffold_143_curated

Search features with annotation key words

Displaying items 1-30 of 185 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_143_curated_1
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

245..844
DNA (600bp) protein (200aa)
gidB; glucose inhibited division protein B; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
Ribosomal RNA small subunit methyltransferase G id=4246731 bin=GWC2_Alphaproteobacteria_42_16 species=Commensalibacter intestini genus=Commensalibacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_curated_2
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

837..1610
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EL48_9BACT
cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_curated_3
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1607..2512
DNA (906bp) protein (302aa)
Chromosome partitioning protein ParB n=1 Tax=uncultured bacterium RepID=K2DWQ9_9BACT
Chromosome segregation DNA-binding protein; K03497 chromosome partitioning protein, ParB family
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_curated_4
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2792..3082
DNA (291bp) protein (97aa)
Excinuclease ABC C subunit domain protein (Fragment) id=2979134 bin=GWC2_Alphaproteobacteria_42_16 species=Legionella pneumophila genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_curated_5
unknown

Not on your lists

3296..3625
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_143_curated_6
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4216..5193)
DNA (978bp) protein (326aa)
id=4246734 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_curated_7
unknown

Not on your lists

comp(5183..5392)
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_143_curated_8
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5389..6069)
DNA (681bp) protein (227aa)
Uncharacterized protein id=4246735 bin=GWC2_Alphaproteobacteria_42_16 species=Thalassospira profundimaris genus=Thalassospira taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein; K03643 LPS-assembly lipoprotein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_curated_9

Not on your lists


comp(6056..8596)
DNA (2541bp) protein (847aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
leuS; leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucine--tRNA ligase n=1 Tax=uncultured bacterium RepID=K2EJ73_9BACT
SCNpilot_cont_1000_p_scaffold_143_curated_10
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8605..9114)
DNA (510bp) protein (170aa)
Putative uncharacterized protein id=4246798 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_curated_11
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9523..14364)
DNA (4842bp) protein (1614aa)
NAD-glutamate dehydrogenase; K15371 glutamate dehydrogenase [EC:1.4.1.2]
NAD-glutamate dehydrogenase id=3827324 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_curated_12
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15040..15381
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FF39_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_curated_13
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15383..15772
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DTS9_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_curated_14
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15979..16164
DNA (186bp) protein (62aa)
id=4444424 bin=GWC2_Alphaproteobacteria_42_16 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_curated_15
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16506..17414
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IX06_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGW23361.1}; Flags: Precursor;; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
LppY/LpqO family protein
SCNpilot_cont_1000_p_scaffold_143_curated_16
unknown

Not on your lists

17519..17698
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_143_curated_17

Not on your lists

17796..20015
DNA (2220bp) protein (740aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EVA1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE09579.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ftsK; DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
SCNpilot_cont_1000_p_scaffold_143_curated_18
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20018..20722
DNA (705bp) protein (235aa)
Outer membrane lipoprotein-sorting protein id=3710575 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Outer membrane lipoprotein-sorting protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_curated_19
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20736..21065)
DNA (330bp) protein (110aa)
transcriptional modulator of MazE/toxin MazF; K07171 mRNA interferase [EC:3.1.-.-]
mRNA interferase n=1 Tax=uncultured bacterium RepID=K2EIF4_9BACT
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_curated_20
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21053..21307)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EGN0_9BACT
transcriptional regulator/antitoxin MazE; K07172 antitoxin
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_curated_21
unknown

Not on your lists

comp(21438..22316)
DNA (879bp) protein (293aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_143_curated_22
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22778..26164
DNA (3387bp) protein (1129aa)
acylglycerophosphoethanolamine acyltransferase (EC:6.2.1.20); K05939 acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
AMP-dependent synthetase and ligase id=3443398 bin=GWC2_Alphaproteobacteria_42_16 species=Nitrosomonas eutropha genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_curated_23
Genlisea aurea, Genlisea, Lamiales, asterids, Streptophyta, Viridiplantae

Not on your lists

comp(26181..26504)
DNA (324bp) protein (108aa)
Addiction module antidote protein (Fragment) n=1 Tax=Genlisea aurea RepID=S8DEG4_9LAMI
Addiction module antidote protein {ECO:0000313|EMBL:EPS57787.1}; Flags: Fragment;; TaxID=192259 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea.;" source="Genlisea aurea.;"
addiction module antidote protein
SCNpilot_cont_1000_p_scaffold_143_curated_24
unknown

Not on your lists

comp(26955..27122)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_143_curated_25
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27281..28177)
DNA (897bp) protein (299aa)
GTPase Era n=1 Tax=uncultured bacterium RepID=K2DV90_9BACT
era; GTP-binding protein; K03595 GTP-binding protein Era
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_curated_26
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28170..28841)
DNA (672bp) protein (224aa)
ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3]
Ribonuclease 3 id=3710700 bin=GWC2_Alphaproteobacteria_42_16 species=Roseibium sp. TrichSKD4 genus=Roseibium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_143_curated_27

Not on your lists

comp(28841..29602)
DNA (762bp) protein (254aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89]
Signal peptidase I id=3710703 bin=GWC2_Alphaproteobacteria_42_16 species=Methylocella silvestris genus=Methylocella taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
SCNpilot_cont_1000_p_scaffold_143_curated_28
Mycobacterium orygis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29785..32166)
DNA (2382bp) protein (794aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B1B2
PE-PGRS family protein
Uncharacterized protein {ECO:0000313|EMBL:EMT37122.1}; TaxID=1305739 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium orygis 112400015.;"
SCNpilot_cont_1000_p_scaffold_143_curated_29
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32433..35894
DNA (3462bp) protein (1154aa)
ankyrin and tpr repeat domain protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225A8E7
Uncharacterized protein {ECO:0000313|EMBL:AIK96338.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_143_curated_30
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36104..37027
DNA (924bp) protein (308aa)
arginase/agmatinase/formiminoglutamase; K01476 arginase [EC:3.5.3.1]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EJL2_9BACT
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
Displaying items 1-30 of 185 in total

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