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SCNpilot_cont_1000_p_scaffold_674_curated

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_674_curated_1
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(48..560)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESQ7_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06259.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_1000_p_scaffold_674_curated_2
unknown

Not on your lists

comp(897..1064)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_674_curated_3
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1671..3023
DNA (1353bp) protein (451aa)
sugar phosphate permease id=4468772 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
uhpC; sugar phosphate permease; K02445 MFS transporter, OPA family, glycerol-3-phosphate transporter
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_674_curated_4

Not on your lists

comp(3020..3349)
DNA (330bp) protein (110aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=uncultured bacterium RepID=K2FF07_9BACT
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:EKE09215.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Iron-sulfur cluster assembly accessory protein; K15724 iron-sulfur cluster insertion protein
SCNpilot_cont_1000_p_scaffold_674_curated_5

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3826..5571
DNA (1746bp) protein (582aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19]
Arginine--tRNA ligase n=1 Tax=uncultured bacterium RepID=K2DTP6_9BACT
SCNpilot_cont_1000_p_scaffold_674_curated_6

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5568..6344
DNA (777bp) protein (259aa)
Protein TonB id=4468730 bin=GWC2_Alphaproteobacteria_42_16 species=Thalassospira xiamenensis genus=Thalassospira taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Periplasmic protein TonB, links inner and outer membrane {ECO:0000313|EMBL:EKE09217.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_674_curated_7

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6331..7260
DNA (930bp) protein (310aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
beta-N-acetylhexosaminidase (EC:3.2.1.52); K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EGK6_9BACT
SCNpilot_cont_1000_p_scaffold_674_curated_8

Not on your lists

7260..7919
DNA (660bp) protein (220aa)
Peptidase M50 n=1 Tax=uncultured bacterium RepID=K2EU81_9BACT
Peptidase M50 {ECO:0000313|EMBL:EKE09219.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
peptidase M50 family
SCNpilot_cont_1000_p_scaffold_674_curated_9
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7964..8152
DNA (189bp) protein (63aa)
Sec-independent protein translocase protein TatA id=4468741 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Rickettsia taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
tatA; twin-arginine translocation protein TatA; K03116 sec-independent protein translocase protein TatA
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_674_curated_10
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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8149..8376
DNA (228bp) protein (76aa)
Sec-independent protein translocase protein TatB id=4468745 bin=GWC2_Alphaproteobacteria_42_16 species=Asticcacaulis excentricus genus=Asticcacaulis taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
tatB; Sec-independent protein translocase protein TatB; K03117 sec-independent protein translocase protein TatB
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_674_curated_11
RBG_16_Gammaproteobacteria_37_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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8444..9589
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E4D5_9BACT
Tax=RBG_16_Gammaproteobacteria_37_9_curated
SCNpilot_cont_1000_p_scaffold_674_curated_12
Yersinia mollaretii, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9655..10770)
DNA (1116bp) protein (372aa)
group 1 glycosyl transferase; K12995 rhamnosyltransferase [EC:2.4.1.-]
Glycosyl transferase WbpZ n=1 Tax=Yersinia mollaretii ATCC 43969 RepID=C4S7I1_YERMO
Glycosyl transferase WbpZ {ECO:0000313|EMBL:EEQ12381.1}; TaxID=349967 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia mollaretii ATCC 43969.;"
SCNpilot_cont_1000_p_scaffold_674_curated_13
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10772..11395)
DNA (624bp) protein (208aa)
Sialic acid O-acetyltransferase NeuD family sugar O-acyltransferase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PDC2_9BRAD
Sialic acid O-acetyltransferase NeuD family sugar O-acyltransferase {ECO:0000313|EMBL:EKS38724.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
acetyltransferase
SCNpilot_cont_1000_p_scaffold_674_curated_14
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11395..13047)
DNA (1653bp) protein (551aa)
Glycosyl transferase, group 1 n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J978_DESRM
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABO51631.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
SCNpilot_cont_1000_p_scaffold_674_curated_15
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13038..15326)
DNA (2289bp) protein (763aa)
Glycosyl transferase, group 1 n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J979_DESRM
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABO51632.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
SCNpilot_cont_1000_p_scaffold_674_curated_16
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15323..15835)
DNA (513bp) protein (171aa)
Glycosyl transferase, group 1 n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J979_DESRM
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABO51632.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
SCNpilot_cont_1000_p_scaffold_674_curated_17
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15852..16421)
DNA (570bp) protein (190aa)
Glycosyl transferase, group 1 n=1 Tax=Thiocapsa marina 5811 RepID=F9U6Z1_9GAMM
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EGV20017.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
group 1 glycosyl transferase
SCNpilot_cont_1000_p_scaffold_674_curated_18
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16418..17173)
DNA (756bp) protein (252aa)
RfbE, O-antigen export system ATP-binding protein RfbE n=1 Tax=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) RepID=A0KMA2_AERHH
Teichoic acid ABC transporter ATPase {ECO:0000313|EMBL:KJZ56962.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
RfbE, O-antigen export system ATP-binding protein RfbE; K09691 lipopolysaccharide transport system ATP-binding protein
SCNpilot_cont_1000_p_scaffold_674_curated_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17170..17952)
DNA (783bp) protein (261aa)
ABC transporter system integral protein n=1 Tax=Escherichia hermannii RepID=B0I540_ESCHE
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1444134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-182-04_S3_C1.;"
ABC transporter permease; K09690 lipopolysaccharide transport system permease protein
SCNpilot_cont_1000_p_scaffold_674_curated_20
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18212..19303)
DNA (1092bp) protein (364aa)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase {ECO:0000313|EMBL:AIL66189.1}; EC=2.6.1.87 {ECO:0000313|EMBL:AIL66189.1};; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
aminotransferase DegT n=1 Tax=Acidovorax radicis RepID=UPI000237864E
perosamine synthetase, Per protein; K13010 perosamine synthetase
SCNpilot_cont_1000_p_scaffold_674_curated_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19317..20408)
DNA (1092bp) protein (364aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47]
GDP-mannose 4,6-dehydratase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIV8_9BRAD
SCNpilot_cont_1000_p_scaffold_674_curated_22
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20493..21905)
DNA (1413bp) protein (471aa)
Phosphomannomutase/phosphoglucomutase {ECO:0000313|EMBL:AIL65364.1}; EC=5.4.2.2 {ECO:0000313|EMBL:AIL65364.1};; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
phosphomannomutase (EC:5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
Phosphomannomutase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY21_HALNC
SCNpilot_cont_1000_p_scaffold_674_curated_23
Rickettsiales bacterium Ac37b, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21895..23325)
DNA (1431bp) protein (477aa)
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (EC:2.7.7.13); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
mannose-1-phosphate guanylyltransferase n=1 Tax=Legionella tunisiensis RepID=UPI0002FB90CA
Alginate biosynthesis protein AlgA {ECO:0000313|EMBL:AIL65363.1}; TaxID=1528098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales.;" source="Rickettsiales bacterium Ac37b.;"
SCNpilot_cont_1000_p_scaffold_674_curated_24
Tatlockia micdadei, Tatlockia, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23421..24377)
DNA (957bp) protein (319aa)
IAA acetyltransferase/MarR transcriptional regulatory protein n=1 Tax=Legionella pneumophila subsp. pneumophila RepID=I7HR55_LEGPN
HTH transcriptional regulator, MarR {ECO:0000313|EMBL:CEG60716.1}; TaxID=451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Tatlockia.;" source="Tatlockia micdadei (Legionella micdadei).;"
IAA acetyltransferase/MarR transcriptional regulatory protein
SCNpilot_cont_1000_p_scaffold_674_curated_25
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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24474..25193
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Rickettsiaceae bacterium Os18 RepID=UPI00035ED4B2
Putative Predicted metal-dependent hydrolases {ECO:0000313|EMBL:CEG56601.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
metal-dependent hydrolase
SCNpilot_cont_1000_p_scaffold_674_curated_26
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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25204..25842
DNA (639bp) protein (213aa)
Amino acid transporter LysE n=1 Tax=uncultured bacterium RepID=K2FG37_9BACT
amino acid transporter LysE
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_674_curated_27
unknown

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comp(25931..26515)
DNA (585bp) protein (195aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_674_curated_28

Not on your lists

26693..28009
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EXH1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE10259.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative phospholipid/glycerol acyltransferase
SCNpilot_cont_1000_p_scaffold_674_curated_29

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comp(28042..29118)
DNA (1077bp) protein (359aa)
NAD(P) transhydrogenase subunit alpha (EC:1.6.1.2)
NAD(P) transhydrogenase, alpha subunit n=1 Tax=uncultured bacterium RepID=K1ZXY1_9BACT
Alanine dehydrogenase/PNT, N-terminal domain protein {ECO:0000313|EMBL:AIA17657.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_1000_p_scaffold_674_curated_30
Simkania negevensis, Simkania, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(29087..29536)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L9A7_SIMNZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB89426.1}; TaxID=331113 species="Bacteria; Chlamydiae; Chlamydiales; Simkaniaceae; Simkania.;" source="Simkania negevensis (strain ATCC VR-1471 / Z).;"
Displaying items 1-30 of 50 in total

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