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SCNpilot_cont_1000_p_scaffold_1045_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1045_curated_1
unknown

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971..2098
DNA (1128bp) protein (376aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1045_curated_2
Legionella massiliensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2183..2992)
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WM38_9BACI
Dephospho-CoA kinase/protein folding accessory domain-containing protein {ECO:0000313|EMBL:CDZ77738.1}; TaxID=1034943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella massiliensis.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_1045_curated_3
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2996..3313)
DNA (318bp) protein (106aa)
Thioredoxin n=1 Tax=uncultured bacterium RepID=K2EVC6_9BACT
thioredoxin; K03671 thioredoxin 1
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_1045_curated_4
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3329..6649)
DNA (3321bp) protein (1107aa)
ATP-dependent exoDNAse beta subunit id=3710583 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
putative DNA helicase UvrD-like
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_1045_curated_5
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6649..9570)
DNA (2922bp) protein (974aa)
Inactivated superfamily I helicase id=3710587 bin=GWC2_Alphaproteobacteria_42_16 species=Magnetospirillum sp. SO-1 genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_1045_curated_6
R_Gammaproteobacteria_42_10, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9911..10339)
DNA (429bp) protein (143aa)
Uncharacterized protein family UPF0150 n=1 Tax=Geobacter sp. (strain M18) RepID=E8WRR6_GEOS8
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_42_10_curated
SCNpilot_cont_1000_p_scaffold_1045_curated_7
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10336..10521)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Legionella pneumophila subsp. pneumophila RepID=I7HXT5_LEGPN
hypothetical protein
YcfA-like protein {ECO:0000313|EMBL:GAN23177.1}; TaxID=446 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila.;"
SCNpilot_cont_1000_p_scaffold_1045_curated_8

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10656..12716
DNA (2061bp) protein (687aa)
Putative Mechanosensitive ion channel protein id=2555659 bin=GWC2_Alphaproteobacteria_42_16 species=Phaeospirillum molischianum genus=Phaeospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Uncharacterized protein {ECO:0000313|EMBL:EKE09128.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
mechanosensitive ion channel
SCNpilot_cont_1000_p_scaffold_1045_curated_9

Not on your lists

12973..13470
DNA (498bp) protein (166aa)
Transcriptional regulator id=2555656 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Transcription factor CarD-like protein {ECO:0000313|EMBL:EKE09129.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transcriptional regulator; K07736 CarD family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1045_curated_10
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13758..14771
DNA (1014bp) protein (338aa)
thioredoxin reductase id=2555653 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
putative thioredoxin reductase,FAD/NAD(P)-binding
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_1045_curated_11
unknown

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comp(14815..15495)
DNA (681bp) protein (227aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1045_curated_12

Not on your lists

comp(15601..17988)
DNA (2388bp) protein (796aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Sensor protein divL id=2555650 bin=GWC2_Alphaproteobacteria_42_16 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
divL; sensor protein divL
SCNpilot_cont_1000_p_scaffold_1045_curated_13
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18097..18591)
DNA (495bp) protein (165aa)
nudH; putative (di)nucleoside polyphosphate hydrolase; K08311 putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
RNA pyrophosphohydrolase n=1 Tax=uncultured bacterium RepID=K2EI56_9BACT
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_1045_curated_14
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18853..20247)
DNA (1395bp) protein (465aa)
Carboxyl-terminal protease (EC:3.4.21.102)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ETZ8_9BACT
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_1045_curated_15
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20262..21272)
DNA (1011bp) protein (337aa)
M23 peptidase domain protein id=2555634 bin=GWC2_Alphaproteobacteria_42_16 species=Labrenzia alexandrii genus=Labrenzia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
M23 family non-proteolytic peptidase
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_1045_curated_16

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comp(21389..22918)
DNA (1530bp) protein (510aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
phosphoglyceromutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=uncultured bacterium RepID=K2DTJ0_9BACT
SCNpilot_cont_1000_p_scaffold_1045_curated_17
unknown

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23265..23681
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1045_curated_18
unknown

Not on your lists

23871..25622
DNA (1752bp) protein (584aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1045_curated_19
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26134..28968
DNA (2835bp) protein (945aa)
UvrABC system protein A n=1 Tax=uncultured bacterium RepID=K2EU18_9BACT
uvrA; excinuclease ABC, subunit A
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_cont_1000_p_scaffold_1045_curated_20
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29299..30084
DNA (786bp) protein (262aa)
Transposase, IS116/IS110/IS902 n=1 Tax=Legionella pneumophila subsp. pneumophila RepID=I7HVS0_LEGPN
Transposase, IS116/IS110/IS902
Transposase, IS116/IS110/IS902 {ECO:0000313|EMBL:CCD06666.1}; TaxID=91891 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila subsp. pneumophila.;"
Displaying 20 items

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