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scnpilot_expt_750_p_scaffold_3037_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_3037_curated_1
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..543
DNA (543bp) protein (181aa)
NADH dehydrogenase; K03885 NADH dehydrogenase [EC:1.6.99.3]
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IG34_9PORP
NADH dehydrogenase {ECO:0000313|EMBL:KHM45160.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
scnpilot_expt_750_p_scaffold_3037_curated_2
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(619..1560)
DNA (942bp) protein (314aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J028_9PORP
scnpilot_expt_750_p_scaffold_3037_curated_3
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1677..2000)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ISX3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02068.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
scnpilot_expt_750_p_scaffold_3037_curated_4
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2010..2813)
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ISX2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02067.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_3037_curated_5
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2803..3435)
DNA (633bp) protein (211aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X116_9PORP
scnpilot_expt_750_p_scaffold_3037_curated_6
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3531..3911)
DNA (381bp) protein (127aa)
Uncharacterized protein n=7 Tax=Parabacteroides RepID=K5YTD7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77278.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
DnaK suppressor protein
scnpilot_expt_750_p_scaffold_3037_curated_7
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3943..7341)
DNA (3399bp) protein (1133aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
Isoleucine--tRNA ligase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X118_9PORP
scnpilot_expt_750_p_scaffold_3037_curated_8
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7843..8187)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IU76_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03255.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_3037_curated_9
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8272..8511)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IU77_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03256.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
scnpilot_expt_750_p_scaffold_3037_curated_10
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8800..9381
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WYX4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04147.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
ABC transporter ATP-binding protein; K06158 ATP-binding cassette, subfamily F, member 3
Displaying 10 items

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