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scnpilot_expt_750_p_scaffold_3620_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_3620_curated_1
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..2149)
DNA (2148bp) protein (716aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
phosphoenolpyruvate carboxylase (EC:4.1.1.31); K01595 phosphoenolpyruvate carboxylase [EC:4.1.1.31]
Phosphoenolpyruvate carboxylase n=2 Tax=Dysgonomonas RepID=F8X0J3_9PORP
scnpilot_expt_750_p_scaffold_3620_curated_2
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2558..3469
DNA (912bp) protein (304aa)
transcriptional regulator n=1 Tax=Alistipes senegalensis RepID=UPI00031B89C5
HTH domain protein {ECO:0000313|EMBL:CEA16232.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
transcriptional regulator
scnpilot_expt_750_p_scaffold_3620_curated_3
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3521..3847
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9QX92_RIEAN
HIRAN domain-containing protein {ECO:0000313|EMBL:CEN43344.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_3620_curated_4
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3863..4399
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JK28_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63988.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
S-layer protein
scnpilot_expt_750_p_scaffold_3620_curated_5
Prevotella sp. CAG:474, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4406..5422
DNA (1017bp) protein (339aa)
Rnl2 family RNA ligase n=1 Tax=Prevotella sp. CAG:474 RepID=R6W6L4_9BACT
Rnl2 family RNA ligase {ECO:0000313|EMBL:CDC99806.1}; TaxID=1262926 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:474.;"
RNA ligase
scnpilot_expt_750_p_scaffold_3620_curated_6
unknown

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5944..6069
DNA (126bp) protein (42aa)

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Displaying 6 items

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