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scnpilot_expt_750_p_scaffold_5433_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_5433_curated_1
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3..854)
DNA (852bp) protein (284aa)
LysR family transcriptional regulator n=1 Tax=Dyadobacter beijingensis RepID=UPI00036C0BAC
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:GAO44092.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
LysR family transcriptional regulator
scnpilot_expt_750_p_scaffold_5433_curated_2
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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953..1549
DNA (597bp) protein (199aa)
NAD(P)H dehydrogenase (Quinone) n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FB00_FLAJ1
NADPH quinone reductase MdaB {ECO:0000313|EMBL:KFC22104.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
NAD(P)H dehydrogenase (quinone); K03923 modulator of drug activity B
scnpilot_expt_750_p_scaffold_5433_curated_3
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1770..2708
DNA (939bp) protein (313aa)
cysteine synthase (EC:2.5.1.47); K01738 cysteine synthase A [EC:2.5.1.47]
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
Cysteine synthase A n=4 Tax=Clostridium thermocellum RepID=A3DGI2_CLOTH
scnpilot_expt_750_p_scaffold_5433_curated_4
Prevotella bryantii, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2711..3184
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Prevotella bryantii B14 RepID=D8E0M6_PREBR
Uncharacterized protein {ECO:0000313|EMBL:EFI70815.1}; TaxID=752555 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella bryantii B14.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_5433_curated_5
Prevotella bryantii, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3237..3461
DNA (225bp) protein (75aa)
SirA family protein n=1 Tax=Prevotella bryantii B14 RepID=D8E0M7_PREBR
SirA family protein {ECO:0000313|EMBL:EFI70816.1}; TaxID=752555 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella bryantii B14.;"
sira-like domaiN-containing protein
scnpilot_expt_750_p_scaffold_5433_curated_6
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3527..4966
DNA (1440bp) protein (480aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4U5_PALPW
transcriptional regulator, crp/fnr family
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ADQ79739.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_expt_750_p_scaffold_5433_curated_7
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4980..5468
DNA (489bp) protein (163aa)
cysteine desulfurase, sufs subfamily (EC:4.4.1.16); K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Cysteine desulfurase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4U6_PALPW
Displaying 7 items

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