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scnpilot_dereplicated_Bacteroidales_2

scnpilot-dereplicated_Bacteroidales_45_1
In projects: scnpilot-dereplicated  |  SCNPILOT_EXPT_750_P  |  SCN_ET-SeqDB_Dereplicated

Consensus taxonomy: Bacteroidales  →  Bacteroidia  →  Bacteroidetes  →  Bacteria

Displaying items 501-550 of 907 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_expt_750_p_scaffold_6330_curated
Species: Dysgonomonas gadei (60%)
5 4752 bp 45.37 1.00 91.86
scnpilot_expt_750_p_scaffold_2418_curated
Species: Dysgonomonas gadei (50%)
12 11864 bp 48.62 1.00 91.87
scnpilot_expt_750_p_scaffold_24901_curated
Species: Dysgonomonas gadei (100%)
3 1760 bp 47.33 1.00 91.88
scnpilot_expt_750_p_scaffold_2695_curated
Species: Dysgonomonas mossii (70%)
10 10657 bp 47.65 1.00 91.88
scnpilot_expt_750_p_scaffold_6313_curated
Genus: Dysgonomonas (60%)
5 4763 bp 44.80 1.00 91.90
scnpilot_expt_750_p_scaffold_6652_curated
Order: Bacteroidales (75%)
4 4557 bp 46.92 1.00 91.90
scnpilot_expt_750_p_scaffold_4466_curated
Species: Parabacteroides goldsteinii (60%)
5 6534 bp 43.17 1.00 91.92
scnpilot_expt_750_p_scaffold_11756_curated
Genus: Dysgonomonas (66.67%)
3 2914 bp 49.42 1.00 91.94
scnpilot_expt_750_p_scaffold_7022_curated
Species: Dysgonomonas mossii (50%)
4 4368 bp 48.67 1.00 91.96
scnpilot_expt_750_p_scaffold_3111_curated
Genus: Dysgonomonas (55.56%)
9 9163 bp 48.90 1.00 91.97
scnpilot_expt_750_p_scaffold_3052_curated
Order: Bacteroidales (66.67%)
6 9328 bp 47.49 1.00 91.98
scnpilot_expt_750_p_scaffold_22335_curated
Order: Bacteroidales (75%)
4 1885 bp 43.71 1.00 91.99
scnpilot_expt_750_p_scaffold_4708_curated
Species: Paludibacter propionicigenes (66.67%)
6 6230 bp 48.27 1.00 92.02
scnpilot_expt_750_p_scaffold_5952_curated
Genus: Dysgonomonas (60%)
5 5027 bp 48.42 1.00 92.02
scnpilot_expt_750_p_scaffold_16685_curated
Genus: Dysgonomonas (66.67%)
3 2282 bp 47.63 1.00 92.02
scnpilot_expt_750_p_scaffold_6874_curated
Order: Bacteroidales (57.14%)
7 4825 bp 43.23 1.00 92.08
scnpilot_expt_750_p_scaffold_1692_curated
Order: Bacteroidales (75%)
12 17394 bp 43.37 1.00 92.12
scnpilot_expt_750_p_scaffold_7690_curated
Species: Dysgonomonas gadei (60%)
5 4038 bp 47.50 1.00 92.12
scnpilot_expt_750_p_scaffold_35226_curated
Species: Paludibacter propionicigenes (50%)
2 1423 bp 50.25 1.00 92.13
scnpilot_expt_750_p_scaffold_41200_curated
Species: Dysgonomonas gadei (100%)
1 1296 bp 46.99 1.00 92.13
scnpilot_expt_750_p_scaffold_1399_curated
Phylum: Bacteroidetes (60%)
31 21061 bp 43.84 1.00 92.20
scnpilot_expt_750_p_scaffold_33980_curated
Species: Dysgonomonas gadei (50%)
2 1454 bp 45.32 1.00 92.23
scnpilot_expt_750_p_scaffold_19289_curated
Species: Prevotella sp. CAG:1058 (50%)
2 2068 bp 34.86 1.00 92.26
scnpilot_expt_750_p_scaffold_45919_curated
Species: Dysgonomonas gadei (50%)
2 1216 bp 45.07 1.00 92.27
scnpilot_expt_750_p_scaffold_22437_curated
Species: Parabacteroides sp. HGS0025 (50%)
2 1879 bp 43.11 1.00 92.28
scnpilot_expt_750_p_scaffold_5676_curated
Species: Dysgonomonas gadei (50%)
4 5245 bp 47.05 1.00 92.32
scnpilot_expt_750_p_scaffold_2798_curated
Genus: Dysgonomonas (62.5%)
8 10295 bp 47.43 1.00 92.32
scnpilot_expt_750_p_scaffold_4038_curated
Genus: Flavobacterium (60%)
5 7201 bp 47.12 1.00 92.32
scnpilot_expt_750_p_scaffold_55449_curated
Species: Dysgonomonas gadei (50%)
2 1088 bp 45.86 1.00 92.37
scnpilot_expt_750_p_scaffold_1961_curated
Order: Bacteroidales (81.82%)
11 14872 bp 43.05 1.00 92.39
scnpilot_expt_750_p_scaffold_21462_curated
Species: Dysgonomonas mossii (50%)
4 1935 bp 44.03 1.00 92.40
scnpilot_expt_750_p_scaffold_3832_curated
Genus: Dysgonomonas (50%)
6 7571 bp 48.06 1.00 92.41
scnpilot_expt_750_p_scaffold_40743_curated
Species: Bacteroides fragilis (66.67%)
3 1305 bp 46.67 1.00 92.41
scnpilot_expt_750_p_scaffold_3402_curated
Class: Bacteroidia (80%)
5 8478 bp 42.92 1.00 92.43
scnpilot_expt_750_p_scaffold_1956_curated
Order: Bacteroidales (71.43%)
14 14899 bp 46.69 1.00 92.44
scnpilot_expt_750_p_scaffold_10358_curated
Species: Dysgonomonas gadei (75%)
4 3183 bp 44.67 1.00 92.46
scnpilot_expt_750_p_scaffold_13950_curated
Order: Bacteroidales (66.67%)
3 2573 bp 48.66 1.00 92.46
scnpilot_expt_750_p_scaffold_48189_curated
Species: Flavihumibacter petaseus (50%)
2 1181 bp 42.42 1.00 92.46
scnpilot_expt_750_p_scaffold_10604_curated
Genus: Bacteroides (66.67%)
3 3127 bp 45.47 1.00 92.48
scnpilot_expt_750_p_scaffold_4501_curated
Genus: Paludibacter (55.56%)
9 6492 bp 48.15 1.00 92.51
scnpilot_expt_750_p_scaffold_21146_curated
Species: Dysgonomonas gadei (100%)
1 1952 bp 48.00 1.00 92.52
scnpilot_expt_750_p_scaffold_4751_curated
Species: Dysgonomonas mossii (62.5%)
8 6182 bp 46.59 1.00 92.54
scnpilot_expt_750_p_scaffold_4974_curated
Order: Bacteroidales (85.71%)
7 5961 bp 47.86 1.00 92.55
scnpilot_expt_750_p_scaffold_47892_curated
Species: Bacteroides fragilis (100%)
1 1186 bp 46.63 1.00 92.58
scnpilot_expt_750_p_scaffold_6980_curated
Species: Bacteroides sp. D2 (75%)
4 4387 bp 43.54 1.00 92.59
scnpilot_expt_750_p_scaffold_9519_curated
Species: Dysgonomonas mossii (60%)
5 3402 bp 46.62 1.00 92.68
scnpilot_expt_750_p_scaffold_17356_curated
Species: Bacteroides sp. CAG:530 (50%)
2 2217 bp 41.05 1.00 92.69
scnpilot_expt_750_p_scaffold_4740_curated
Order: Bacteroidales (57.14%)
7 6191 bp 29.45 1.00 92.70
scnpilot_expt_750_p_scaffold_18031_curated
Order: Bacteroidales (66.67%)
3 2158 bp 46.01 1.00 92.72
scnpilot_expt_750_p_scaffold_2933_curated
Order: Bacteroidales (85.71%)
7 9777 bp 44.20 1.00 92.76
Displaying items 501-550 of 907 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.