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scnpilot_dereplicated_Bacteroidales_2

scnpilot-dereplicated_Bacteroidales_45_1
In projects: scnpilot-dereplicated  |  SCNPILOT_EXPT_750_P  |  SCN_ET-SeqDB_Dereplicated

Consensus taxonomy: Bacteroidales  →  Bacteroidia  →  Bacteroidetes  →  Bacteria

Metagenomic Context

Auto curated genome
Original version: SCNPILOT_EXPT_750_P_Bacteroidia_45_5.3_partial

Properties

Avg. coverage: 1.00 Longest contig: 28.04 Kbp Bin length: 3.86 Mbp GC content: 44.99 %
Contigs count: 907 Features count: 3853 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 45 / 55 MC: 1 BSCG 44 / 51 MC: 3 ASCG 13 / 38 MC: 3
Displaying items 1-50 of 907 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_expt_750_p_scaffold_1399_curated
Phylum: Bacteroidetes (60%)
31 21061 bp 43.84 1.00 92.20
scnpilot_expt_750_p_scaffold_2050_curated
Order: Bacteroidales (55.17%)
29 28037 bp 42.47 1.00 85.44
scnpilot_expt_750_p_scaffold_1405_curated
Class: Bacteroidia (69.23%)
26 20896 bp 38.55 1.00 91.78
scnpilot_expt_750_p_scaffold_1370_curated
Genus: Dysgonomonas (63.16%)
21 21459 bp 46.11 1.00 89.61
scnpilot_expt_750_p_scaffold_1570_curated
Order: Bacteroidales (77.78%)
18 18760 bp 37.52 1.00 85.14
scnpilot_expt_750_p_scaffold_1665_curated
Order: Bacteroidales (80%)
16 17637 bp 44.71 1.00 87.17
scnpilot_expt_750_p_scaffold_2226_curated
Genus: Dysgonomonas (50%)
16 13027 bp 47.33 1.00 93.66
scnpilot_expt_750_p_scaffold_2402_curated
Order: Bacteroidales (50%)
16 11970 bp 43.84 1.00 85.84
scnpilot_expt_750_p_scaffold_1685_curated
Order: Bacteroidales (60%)
15 17431 bp 46.76 1.00 86.93
scnpilot_expt_750_p_scaffold_2001_curated
Genus: Dysgonomonas (60%)
15 14476 bp 47.00 1.00 91.39
scnpilot_expt_750_p_scaffold_2465_curated
Order: Bacteroidales (73.33%)
15 11636 bp 44.96 1.00 91.78
scnpilot_expt_750_p_scaffold_3614_curated 14 7987 bp 44.99 1.00 85.34
scnpilot_expt_750_p_scaffold_1956_curated
Order: Bacteroidales (71.43%)
14 14899 bp 46.69 1.00 92.44
scnpilot_expt_750_p_scaffold_2043_curated
Genus: Dysgonomonas (50%)
14 14187 bp 46.43 1.00 89.00
scnpilot_expt_750_p_scaffold_2258_curated
Genus: Dysgonomonas (64.29%)
14 12835 bp 45.59 1.00 88.98
scnpilot_expt_750_p_scaffold_1953_curated
Species: Dysgonomonas mossii (50%)
13 14955 bp 45.42 1.00 82.91
scnpilot_expt_750_p_scaffold_2123_curated
Order: Bacteroidales (61.54%)
13 13684 bp 44.61 1.00 87.69
scnpilot_expt_750_p_scaffold_2127_curated
Order: Bacteroidales (53.85%)
13 13664 bp 35.42 1.00 87.16
scnpilot_expt_750_p_scaffold_2638_curated
Order: Bacteroidales (76.92%)
13 10885 bp 46.27 1.00 85.80
scnpilot_expt_750_p_scaffold_2814_curated
Order: Bacteroidales (84.62%)
13 10226 bp 37.26 1.00 89.80
scnpilot_expt_750_p_scaffold_2841_curated
Genus: Dysgonomonas (53.85%)
13 10140 bp 47.39 1.00 93.55
scnpilot_expt_750_p_scaffold_2998_curated
Order: Bacteroidales (61.54%)
13 9523 bp 47.99 1.00 90.89
scnpilot_expt_750_p_scaffold_5507_curated
Genus: Dysgonomonas (75%)
12 5399 bp 44.71 1.00 91.46
scnpilot_expt_750_p_scaffold_1692_curated
Order: Bacteroidales (75%)
12 17394 bp 43.37 1.00 92.12
scnpilot_expt_750_p_scaffold_2093_curated
Phylum: Bacteroidetes (58.33%)
12 13887 bp 46.12 1.00 79.61
scnpilot_expt_750_p_scaffold_6120_curated
Genus: Bacteroides (50%)
12 7957 bp 36.91 1.00 84.94
scnpilot_expt_750_p_scaffold_2253_curated
Genus: Dysgonomonas (58.33%)
12 12870 bp 44.86 1.00 93.80
scnpilot_expt_750_p_scaffold_2290_curated
Species: Dysgonomonas gadei (75%)
12 12636 bp 44.09 1.00 87.80
scnpilot_expt_750_p_scaffold_2350_curated
Species: Paludibacter propionicigenes (50%)
12 12310 bp 48.57 1.00 89.24
scnpilot_expt_750_p_scaffold_2371_curated
Phylum: Bacteroidetes (50%)
12 12184 bp 40.82 1.00 80.34
scnpilot_expt_750_p_scaffold_2418_curated
Species: Dysgonomonas gadei (50%)
12 11864 bp 48.62 1.00 91.87
scnpilot_expt_750_p_scaffold_2803_curated
Genus: Dysgonomonas (50%)
12 10274 bp 42.72 1.00 78.34
scnpilot_expt_750_p_scaffold_2815_curated
Order: Bacteroidales (50%)
12 10223 bp 45.26 1.00 85.78
scnpilot_expt_750_p_scaffold_2844_curated
Class: Bacteroidia (91.67%)
12 10115 bp 46.79 1.00 89.18
scnpilot_expt_750_p_scaffold_2917_curated
Phylum: Bacteroidetes (83.33%)
12 9838 bp 37.02 1.00 90.63
scnpilot_expt_750_p_scaffold_4280_curated
Order: Bacteroidales (60%)
11 6802 bp 38.89 1.00 83.80
scnpilot_expt_750_p_scaffold_5121_curated
Order: Bacteroidales (50%)
11 9097 bp 43.30 1.00 85.28
scnpilot_expt_750_p_scaffold_1655_curated
Phylum: Bacteroidetes (63.64%)
11 17730 bp 35.71 1.00 97.45
scnpilot_expt_750_p_scaffold_1961_curated
Order: Bacteroidales (81.82%)
11 14872 bp 43.05 1.00 92.39
scnpilot_expt_750_p_scaffold_2307_curated
Genus: Dysgonomonas (54.55%)
11 12536 bp 46.50 1.00 87.87
scnpilot_expt_750_p_scaffold_2386_curated
Genus: Dysgonomonas (72.73%)
11 12090 bp 45.09 1.00 84.62
scnpilot_expt_750_p_scaffold_2510_curated
Genus: Dysgonomonas (90.91%)
11 11450 bp 44.97 1.00 85.70
scnpilot_expt_750_p_scaffold_2752_curated
Phylum: Bacteroidetes (90.91%)
11 10477 bp 46.75 1.00 87.45
scnpilot_expt_750_p_scaffold_3460_curated
Order: Bacteroidales (50%)
10 8334 bp 47.78 1.00 95.00
scnpilot_expt_750_p_scaffold_3721_curated
Genus: Dysgonomonas (55.56%)
10 7773 bp 45.09 1.00 81.55
scnpilot_expt_750_p_scaffold_3998_curated
Order: Bacteroidales (70%)
10 7271 bp 46.24 1.00 84.50
scnpilot_expt_750_p_scaffold_4721_curated
Genus: Dysgonomonas (70%)
10 8961 bp 48.14 1.00 94.68
scnpilot_expt_750_p_scaffold_1821_curated
Species: Dysgonomonas gadei (50%)
10 16046 bp 46.88 1.00 92.83
scnpilot_expt_750_p_scaffold_2158_curated
Order: Bacteroidales (50%)
10 13455 bp 45.96 1.00 75.21
scnpilot_expt_750_p_scaffold_2357_curated
Genus: Dysgonomonas (60%)
10 12255 bp 46.16 1.00 87.27
Displaying items 1-50 of 907 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.