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scnpilot_expt_750_p_scaffold_2258_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_2258_curated_1
Prevotella saccharolytica, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..168
DNA (168bp) protein (56aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1127699 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella saccharolytica F0055.;"
Putative ferritin-1 n=1 Tax=Prevotella saccharolytica F0055 RepID=L1N8I9_9BACT
hypothetical protein
scnpilot_expt_750_p_scaffold_2258_curated_2
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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301..1452
DNA (1152bp) protein (384aa)
Sensor histidine kinase n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7JF58_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB58914.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
two-component sensor histidine kinase
scnpilot_expt_750_p_scaffold_2258_curated_3
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1543..1953)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IUN8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02938.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
secG; preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG
scnpilot_expt_750_p_scaffold_2258_curated_4
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1968..2759)
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WZ81_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03953.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_2258_curated_5
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2764..3270)
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IUP0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02940.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_2258_curated_6
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3267..4544)
DNA (1278bp) protein (426aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WZ83_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03955.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
transcriptional regulator
scnpilot_expt_750_p_scaffold_2258_curated_7
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4602..6017)
DNA (1416bp) protein (472aa)
phosphoglucomutase; K01840 phosphomannomutase [EC:5.4.2.8]
Phosphoglucosamine mutase n=2 Tax=Parabacteroides RepID=E1YSE6_9PORP
Phosphoglucosamine mutase {ECO:0000313|EMBL:KKB60589.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
scnpilot_expt_750_p_scaffold_2258_curated_8
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6067..7098)
DNA (1032bp) protein (344aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ISE3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01888.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein; K06881 phosphoesterase RecJ domain-containing protein
scnpilot_expt_750_p_scaffold_2258_curated_9
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7139..9109)
DNA (1971bp) protein (657aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X3F9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05586.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
comec/rec2-related protein; K02238 competence protein ComEC
scnpilot_expt_750_p_scaffold_2258_curated_10
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9206..9865)
DNA (660bp) protein (220aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
Ribulose-phosphate 3-epimerase n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ISG3_9PORP
scnpilot_expt_750_p_scaffold_2258_curated_11
unknown

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comp(10226..10393)
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_2258_curated_12
Parabacteroides sp. CAG:409, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10584..11423
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7J6A2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDE59246.1}; TaxID=1262913 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:409.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_2258_curated_13
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11796..12443
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WXA1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04858.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
phosphate transport regulator; K07220 hypothetical protein
scnpilot_expt_750_p_scaffold_2258_curated_14
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12457..12834
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZV4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01099.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
inorganic phosphate transporter; K03306 inorganic phosphate transporter, PiT family
Displaying 14 items

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