ggKbase home page

scnpilot_expt_750_p_scaffold_1685_curated

Search features with annotation key words

Displaying 15 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_1685_curated_1
unknown

Not on your lists

comp(8..469)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000379549B
scnpilot_expt_750_p_scaffold_1685_curated_2
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(471..1676)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AL73_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB48893.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1685_curated_3
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2120..2857
DNA (738bp) protein (246aa)
Putative uncharacterized protein id=4991586 bin=GWA2_Bacteroidetes_42_15 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_expt_750_p_scaffold_1685_curated_4
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3051..3959
DNA (909bp) protein (303aa)
Transcriptional regulator, AraC family n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VQM4_9SPHI
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFK56075.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
DNA-binding domain-containing protein
scnpilot_expt_750_p_scaffold_1685_curated_5
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4040..5041
DNA (1002bp) protein (334aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VQN0_9SPHI
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EFK56081.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
pyridoxine 4-dehydrogenase
scnpilot_expt_750_p_scaffold_1685_curated_6
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5323..6267)
DNA (945bp) protein (315aa)
Ser/Thr phosphatase family protein n=6 Tax=Bacteroides RepID=C3Q4M2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB36307.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
acid phosphatase
scnpilot_expt_750_p_scaffold_1685_curated_7
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6458..7882)
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037A59D6
Uncharacterized protein {ECO:0000313|EMBL:AJH15941.1}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1685_curated_8
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8027..8434
DNA (408bp) protein (136aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LHD6_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEY83523.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
scnpilot_expt_750_p_scaffold_1685_curated_9
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8521..10872
DNA (2352bp) protein (784aa)
TonB-dependent receptor n=1 Tax=Parabacteroides sp. D13 RepID=C7X548_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:EEO52143.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
Outer membrane receptor for ferrienterochelin and colicins
scnpilot_expt_750_p_scaffold_1685_curated_10
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10956..12653)
DNA (1698bp) protein (566aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ISR8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02013.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1685_curated_11
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12914..13870)
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J2V5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99978.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
putative peptide chain release factor RF-2; K02836 peptide chain release factor 2
scnpilot_expt_750_p_scaffold_1685_curated_12
unknown

Not on your lists

comp(14100..14306)
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1685_curated_13
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14421..15254
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IYT1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01478.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1685_curated_14
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15272..16096
DNA (825bp) protein (275aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;"
murQ; N-acetylmuramic acid 6-phosphate etherase; K07106 N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IYT2_9PORP
scnpilot_expt_750_p_scaffold_1685_curated_15
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16142..17326
DNA (1185bp) protein (395aa)
prolyl oligopeptidase (EC:3.4.21.26); K01322 prolyl oligopeptidase [EC:3.4.21.26]
Prolyl oligopeptidase {ECO:0000313|EMBL:ADQ78271.1}; EC=3.4.21.26 {ECO:0000313|EMBL:ADQ78271.1};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Prolyl oligopeptidase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T081_PALPW
Displaying 15 items

View Taxonomy