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scnpilot_expt_750_p_scaffold_1399_curated

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_1399_curated_1
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..343)
DNA (342bp) protein (114aa)
thiamine pyrophosphate enzyme, C-terminal TPP binding domain-containing protein; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3]
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6A264_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB58736.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
scnpilot_expt_750_p_scaffold_1399_curated_2
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(348..2201)
DNA (1854bp) protein (618aa)
oxidoreductase; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ISR6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02011.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
scnpilot_expt_750_p_scaffold_1399_curated_3
unknown

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2238..2438
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1399_curated_4
Tamlana nanhaiensis, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2377..2841)
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T738_PALPW
Tungsten formylmethanofuran dehydrogenase {ECO:0000313|EMBL:KJD31347.1}; TaxID=1382798 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana nanhaiensis.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1399_curated_5
Bdellovibrio sp. ArHS, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2894..3310)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036AE6D6
Activator of HSP90 ATPase {ECO:0000313|EMBL:KHD87851.1}; TaxID=1569284 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio sp. ArHS.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1399_curated_6
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3601..4737
DNA (1137bp) protein (379aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
sucC; succinyl-CoA synthetase beta chain; K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ITR7_9PORP
scnpilot_expt_750_p_scaffold_1399_curated_7
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4777..5649
DNA (873bp) protein (291aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
succinyl-CoA synthetase alpha chain; K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] rbh
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WZX8_9PORP
scnpilot_expt_750_p_scaffold_1399_curated_8
unknown

Not on your lists

5666..5983
DNA (318bp) protein (106aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1399_curated_9
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5952..6644
DNA (693bp) protein (231aa)
Hydrolase id=3928421 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
HAD superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_expt_750_p_scaffold_1399_curated_10
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6729..8255
DNA (1527bp) protein (509aa)
putative alpha-amylase precursor; K01176 alpha-amylase [EC:3.2.1.1]
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7LDG9_BACOV
Uncharacterized protein {ECO:0000313|EMBL:KKB51351.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
scnpilot_expt_750_p_scaffold_1399_curated_11
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(8245..8445)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:157 RepID=R5WE77_9BACT
Tax=CG_Bacteroid_01
scnpilot_expt_750_p_scaffold_1399_curated_12
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8570..9769
DNA (1200bp) protein (400aa)
Integrase/recombinase id=1885184 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
integrase
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_expt_750_p_scaffold_1399_curated_13
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9820..11208)
DNA (1389bp) protein (463aa)
Pectate lyase/Amb allergen n=1 Tax=Flavobacterium sp. F52 RepID=J1KTG9_9FLAO
Pectate lyase/Amb allergen {ECO:0000313|EMBL:EJG01166.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
Pectate lyase/Amb allergen
scnpilot_expt_750_p_scaffold_1399_curated_14
unknown

Not on your lists

comp(11229..13001)
DNA (1773bp) protein (591aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1399_curated_15
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13022..14218)
DNA (1197bp) protein (399aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J193_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK00467.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1399_curated_16
unknown

Not on your lists

comp(14388..14699)
DNA (312bp) protein (104aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1399_curated_17
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14703..15317)
DNA (615bp) protein (205aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J189_9PORP
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EGK00463.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
scnpilot_expt_750_p_scaffold_1399_curated_18
Bacteroides helcogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15314..15853)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108) RepID=E6SUA1_BACT6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV44374.1}; Flags: Precursor;; TaxID=693979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P; 36-108).;"
scnpilot_expt_750_p_scaffold_1399_curated_19
unknown

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comp(16002..16124)
DNA (123bp) protein (41aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1399_curated_20
unknown

Not on your lists

comp(16121..16552)
DNA (432bp) protein (144aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1399_curated_21
unknown

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comp(16570..16848)
DNA (279bp) protein (93aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1399_curated_22
unknown

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comp(16841..17074)
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1399_curated_23
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17226..17735)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IXM7_CYCMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL28024.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_expt_750_p_scaffold_1399_curated_24
unknown

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comp(17739..17987)
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1399_curated_25
unknown

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comp(18005..18487)
DNA (483bp) protein (161aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1399_curated_26
unknown

Not on your lists

18495..18659
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1399_curated_27
Bacteroides fragilis CAG:558, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18647..18904
DNA (258bp) protein (86aa)
Helix-turn-helix domain protein n=1 Tax=Bacteroides fragilis CAG:558 RepID=R5RS50_9BACE
Helix-turn-helix domain protein {ECO:0000313|EMBL:CCZ37631.1}; TaxID=1263047 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:558.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1399_curated_28
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18976..19275)
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7LF90_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN00729.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
scnpilot_expt_750_p_scaffold_1399_curated_29
Bacteroides sp. CAG:462, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19514..19759)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:462 RepID=R7CY92_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD83005.1}; TaxID=1262740 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:462.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_1399_curated_30
unknown

Not on your lists

comp(19805..19951)
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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