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scnpilot_expt_750_p_scaffold_5121_curated

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Displaying 11 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_5121_curated_1
unknown

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comp(3..317)
DNA (315bp) protein (105aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_5121_curated_2
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(314..859)
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J440_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99511.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_expt_750_p_scaffold_5121_curated_3
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1280..2173)
DNA (894bp) protein (298aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Dysgonomonas RepID=F8WYF8_9PORP
scnpilot_expt_750_p_scaffold_5121_curated_4
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2223..2774)
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WYF7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04289.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_5121_curated_5
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2771..4753)
DNA (1983bp) protein (661aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=2 Tax=Bacteroidetes RepID=F3XXZ2_9FLAO
scnpilot_expt_750_p_scaffold_5121_curated_6
unknown

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comp(4817..5296)
DNA (480bp) protein (160aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_5121_curated_7
unknown

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comp(5840..5941)
DNA (102bp) protein (34aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_5121_curated_8
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6003..7205
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036A65FD
Uncharacterized protein {ECO:0000313|EMBL:KKB50343.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
scnpilot_expt_750_p_scaffold_5121_curated_9
unknown

Not on your lists

7313..7558
DNA (246bp) protein (82aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_5121_curated_10
unknown

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7624..8400
DNA (777bp) protein (259aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_5121_curated_11
Croceibacter atlanticus, Croceibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8425..9084
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3U5U7_CROAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAP87614.1}; TaxID=216432 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Croceibacter.;" source="Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090).;"
Displaying 11 items

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