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scnpilot_expt_750_p_scaffold_2402_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_2402_curated_1
unknown

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comp(3..128)
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_2402_curated_2
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(275..1429)
DNA (1155bp) protein (385aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X335_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05513.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_2402_curated_3
unknown

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1498..1644
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_2402_curated_4
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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1744..1941
DNA (198bp) protein (66aa)
Type III restriction protein res subunit n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V6X1_ARCNC
Uncharacterized protein {ECO:0000313|EMBL:KHE91566.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
type III restriction protein res subunit
scnpilot_expt_750_p_scaffold_2402_curated_5
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2195..2500
DNA (306bp) protein (102aa)
DNA mismatch repair protein MutS n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J1J6_9PORP
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
DNA mismatch repair protein muts; K03555 DNA mismatch repair protein MutS
scnpilot_expt_750_p_scaffold_2402_curated_6
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2505..4436)
DNA (1932bp) protein (644aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6IAK2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKJ91750.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
scnpilot_expt_750_p_scaffold_2402_curated_7
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4452..4997)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6IAK3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKJ91751.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_2402_curated_8
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5146..5763)
DNA (618bp) protein (206aa)
type II site-specific deoxyribonuclease (EC:3.1.21.4)
Restriction endonuclease {ECO:0000313|EMBL:KFC19443.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
Probable type II restriction endonuclease id=3035737 bin=GWF2_Lentisphaerae_38_69 species=Flavobacterium branchiophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
scnpilot_expt_750_p_scaffold_2402_curated_9
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5888..7006)
DNA (1119bp) protein (373aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IVK5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02655.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
DNA protecting protein DprA; K04096 DNA processing protein
scnpilot_expt_750_p_scaffold_2402_curated_10
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7043..7717)
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WXW1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04564.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
fructose-2,6-bisphosphatase
scnpilot_expt_750_p_scaffold_2402_curated_11
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7751..8158)
DNA (408bp) protein (136aa)
thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WXW0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04563.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_2402_curated_12
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8496..9302)
DNA (807bp) protein (269aa)
glycosyl transferase family protein; K00703 starch synthase [EC:2.4.1.21]
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X157_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03329.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_2402_curated_13
unknown

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comp(9417..9584)
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_2402_curated_14
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9633..10538
DNA (906bp) protein (302aa)
Transcriptional regulator, AraC family n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C1E7_SPHS2
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADZ79220.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_expt_750_p_scaffold_2402_curated_15
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10637..11068
DNA (432bp) protein (144aa)
Arabinose efflux permease family protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CP62_9FLAO
Multidrug transporter {ECO:0000313|EMBL:KFE98038.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
major facilitator superfamily protein
scnpilot_expt_750_p_scaffold_2402_curated_16
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11108..11839
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003655818
Inner membrane transport protein YdhC {ECO:0000313|EMBL:AJW63156.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
major facilitator superfamily protein
Displaying 16 items

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