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SCNpilot_cont_300_bf_scaffold_3375_curated

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3375_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..859
DNA (858bp) protein (286aa)
enoyl-CoA hydratase/isomerase; K01692 enoyl-CoA hydratase [EC:4.2.1.17]
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0A1_BREDI
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:EGF94924.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_3375_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

911..2281
DNA (1371bp) protein (457aa)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EGF94923.1}; EC=2.5.1.54 {ECO:0000313|EMBL:EGF94923.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0A0_BREDI
SCNpilot_cont_300_bf_scaffold_3375_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2278..2844
DNA (567bp) protein (189aa)
prephenate dehydratase (EC:4.2.1.51); K04518 prephenate dehydratase [EC:4.2.1.51]
Prephenate dehydratase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R099_BREDI
Prephenate dehydratase {ECO:0000313|EMBL:EGF94922.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_3375_curated_4
unknown

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2913..3014
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3375_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3154..3915
DNA (762bp) protein (254aa)
Chorismate mutase type II family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R098_BREDI
Chorismate mutase type II family protein {ECO:0000313|EMBL:EGF94921.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
chorismate mutase, type II
SCNpilot_cont_300_bf_scaffold_3375_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4002..4610
DNA (609bp) protein (203aa)
Sporulation related domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R097_BREDI
Sporulation related domain protein {ECO:0000313|EMBL:EGF94920.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_3375_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4731..5564
DNA (834bp) protein (278aa)
ATPase MipZ family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R096_BREDI
ATPase MipZ family protein {ECO:0000313|EMBL:EGF94919.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
ATPase MipZ; K03496 chromosome partitioning protein
SCNpilot_cont_300_bf_scaffold_3375_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5572..6003
DNA (432bp) protein (144aa)
DnaJ domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R095_BREDI
DnaJ domain protein {ECO:0000313|EMBL:EGF94918.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
heat shock protein DnaJ domain-containing protein
SCNpilot_cont_300_bf_scaffold_3375_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6320..6796
DNA (477bp) protein (159aa)
50S ribosomal protein L13 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R093_BREDI
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13
SCNpilot_cont_300_bf_scaffold_3375_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6799..7287
DNA (489bp) protein (163aa)
30S ribosomal protein S9 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R092_BREDI
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9
SCNpilot_cont_300_bf_scaffold_3375_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7526..8461
DNA (936bp) protein (312aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110, ECO:0000256|SAAS:SAAS00015955}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_01110, ECO:0000256|SAAS:SAAS00015955};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01110}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R091_BREDI
SCNpilot_cont_300_bf_scaffold_3375_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8483..8860)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QR16_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY29997.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3375_curated_13
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8857..10836)
DNA (1980bp) protein (660aa)
poly(R)-hydroxyalkanoic acid synthase, class I; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
Poly-beta-hydroxybutyrate polymerase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R089_BREDI
Poly-beta-hydroxybutyrate polymerase {ECO:0000313|EMBL:EGF94912.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_3375_curated_14
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10901..11368
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R088_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94911.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3375_curated_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11641..13284
DNA (1644bp) protein (548aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EGF94910.1}; EC=3.1.-.- {ECO:0000313|EMBL:EGF94910.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R087_BREDI
SCNpilot_cont_300_bf_scaffold_3375_curated_16
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13949..14470
DNA (522bp) protein (174aa)
Cold-shock DNA-binding domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R086_BREDI
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EGF94909.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family)
SCNpilot_cont_300_bf_scaffold_3375_curated_17
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14497..14973
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R085_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94908.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein; K09005 hypothetical protein
SCNpilot_cont_300_bf_scaffold_3375_curated_18
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15136..16176)
DNA (1041bp) protein (347aa)
Integrase n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7GU04_9RHIZ
Integrase {ECO:0000313|EMBL:ESY99202.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
phage-related integrase
SCNpilot_cont_300_bf_scaffold_3375_curated_19
unknown

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comp(16157..16357)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3375_curated_20
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16354..16695)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYB3_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94680.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_3375_curated_21
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16692..16907)
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVX4_9SPHN
DNA, contig: SP612 {ECO:0000313|EMBL:GAN12745.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_300_bf_scaffold_3375_curated_22
unknown

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comp(17506..17712)
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying 22 items

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