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SCNpilot_cont_300_bf_scaffold_2440_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2440_curated_1
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..456)
DNA (456bp) protein (152aa)
ABC-type Fe3+-siderophore transport system, permease component n=1 Tax=Caulobacter sp. AP07 RepID=J3AUK5_9CAUL
ABC-type Fe3+-siderophore transport system, permease component {ECO:0000313|EMBL:EJL38221.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
transport system permease; K02015 iron complex transport system permease protein
SCNpilot_cont_300_bf_scaffold_2440_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(453..1304)
DNA (852bp) protein (284aa)
Periplasmic binding protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWM9_BREDI
Periplasmic binding protein {ECO:0000313|EMBL:EGF95433.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_2440_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1301..2311)
DNA (1011bp) protein (337aa)
Threonine-phosphate decarboxylase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWN0_BREDI
Threonine-phosphate decarboxylase {ECO:0000313|EMBL:EGF95434.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
class I and II aminotransferase; K02225 cobalamin biosynthetic protein CobC
SCNpilot_cont_300_bf_scaffold_2440_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2308..4248)
DNA (1941bp) protein (647aa)
Vitamin B12 transporter btuB n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWN1_BREDI
Vitamin B12 transporter btuB {ECO:0000313|EMBL:EGF95435.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
SCNpilot_cont_300_bf_scaffold_2440_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4629..5150
DNA (522bp) protein (174aa)
Adenosylcobalamin biosynthesis protein cobP {ECO:0000313|EMBL:EGF95436.1}; EC=2.7.7.62 {ECO:0000313|EMBL:EGF95436.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
adenosylcobinamide-phosphate guanylyltransferase (EC:2.7.7.62); K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
Adenosylcobalamin biosynthesis protein cobP n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWN2_BREDI
SCNpilot_cont_300_bf_scaffold_2440_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5161..5730)
DNA (570bp) protein (190aa)
HNH endonuclease family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWN3_BREDI
HNH endonuclease family protein {ECO:0000313|EMBL:EGF95437.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
HNH endonuclease
SCNpilot_cont_300_bf_scaffold_2440_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5886..6284)
DNA (399bp) protein (133aa)
ASCH domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWN6_BREDI
ASCH domain protein {ECO:0000313|EMBL:EGF95440.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
ASCH domain-containing protein
SCNpilot_cont_300_bf_scaffold_2440_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6306..6959)
DNA (654bp) protein (218aa)
UPF0126 domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWN7_BREDI
UPF0126 domain protein {ECO:0000313|EMBL:EGF95441.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2440_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7030..7683)
DNA (654bp) protein (218aa)
HhH-GPD family protein; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
HhH-GPD superfamily base excision DNA repair family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWN8_BREDI
HhH-GPD superfamily base excision DNA repair family protein {ECO:0000313|EMBL:EGF95442.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_2440_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7773..8621
DNA (849bp) protein (283aa)
glutamyl/glutaminyl-tRNA synthetase subunit IC; K01894 glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
tRNA synthetase class I E and Q, catalytic domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWP1_BREDI
tRNA synthetase class I E and Q, catalytic domain protein {ECO:0000313|EMBL:EGF95445.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_2440_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8635..8958)
DNA (324bp) protein (108aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWP2_BREDI
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
flagellar hook-basal body complex protein FliE; K02408 flagellar hook-basal body complex protein FliE
SCNpilot_cont_300_bf_scaffold_2440_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8972..9406)
DNA (435bp) protein (145aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWP3_BREDI
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
flagellar basal-body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC
SCNpilot_cont_300_bf_scaffold_2440_curated_13
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9420..9824)
DNA (405bp) protein (135aa)
Flagellar basal body rod protein FlgB n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWP4_BREDI
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
flagellar basal body rod protein; K02387 flagellar basal-body rod protein FlgB
SCNpilot_cont_300_bf_scaffold_2440_curated_14
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9977..10255
DNA (279bp) protein (93aa)
Flagellar protein FliO n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWP5_BREDI
Flagellar protein FliO {ECO:0000313|EMBL:EGF95449.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
flagellar protein FliO; K02418 flagellar protein FliO/FliZ
SCNpilot_cont_300_bf_scaffold_2440_curated_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10252..11439
DNA (1188bp) protein (396aa)
Flagellar biosynthetic protein FliP n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QRW3_BREDI
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:EKY30656.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
flagellar biosynthetic protein FliP; K02419 flagellar biosynthetic protein FliP
Displaying 15 items

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