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SCNpilot_cont_300_bf_scaffold_3233_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3233_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..929
DNA (927bp) protein (309aa)
TonB dependent receptor family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWL8_BREDI
TonB dependent receptor family protein {ECO:0000313|EMBL:EGF95422.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
TonB-dependent receptor
SCNpilot_cont_300_bf_scaffold_3233_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1149..1469
DNA (321bp) protein (107aa)
Quaternary ammonium compound-resistance protein sugE n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWL7_BREDI
Quaternary ammonium compound-resistance protein sugE {ECO:0000313|EMBL:EGF95421.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
small multidrug resistance protein; K11741 quaternary ammonium compound-resistance protein SugE
SCNpilot_cont_300_bf_scaffold_3233_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1497..2153
DNA (657bp) protein (219aa)
glutathione S-transferase; K04097 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWL6_BREDI
Glutathione S-transferase {ECO:0000313|EMBL:EGF95420.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_3233_curated_4
unknown

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2222..2332
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3233_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2349..3158)
DNA (810bp) protein (270aa)
Transglycosylase SLT domain protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QBN0_BREDI
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EKY25027.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
lytic transglycosylase
SCNpilot_cont_300_bf_scaffold_3233_curated_6
unknown

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3394..4224
DNA (831bp) protein (277aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3233_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4116..4355)
DNA (240bp) protein (80aa)
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7]
Uracil-DNA glycosylase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWL4_BREDI
Uracil-DNA glycosylase {ECO:0000313|EMBL:EGF95418.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_3233_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4820..6580
DNA (1761bp) protein (587aa)
electron-transferring-flavoprotein dehydrogenase (EC:1.5.5.1); K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
FAD dependent oxidoreductase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QBF3_BREDI
FAD dependent oxidoreductase {ECO:0000313|EMBL:EKY25025.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_3233_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6612..8540
DNA (1929bp) protein (643aa)
Tetratricopeptide repeat family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWL3_BREDI
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:EGF95417.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3233_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8686..9447
DNA (762bp) protein (254aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148); K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QAN6_BREDI
SCNpilot_cont_300_bf_scaffold_3233_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9483..9656
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QBM5_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY25022.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Displaying 11 items

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