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SCNpilot_cont_300_bf_scaffold_2335_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2335_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..565)
DNA (564bp) protein (188aa)
carboxyl transferase; K01966 propionyl-CoA carboxylase beta chain [EC:6.4.1.3]
Carboxyl transferase domain protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QR49_BREDI
Carboxyl transferase domain protein {ECO:0000313|EMBL:EKY30170.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_2335_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1705..2046
DNA (342bp) protein (114aa)
Helix-turn-helix family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1Z3_BREDI
Helix-turn-helix family protein {ECO:0000313|EMBL:EGF95133.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
XRE family transcriptional regulator; K07110
SCNpilot_cont_300_bf_scaffold_2335_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2247..3011)
DNA (765bp) protein (255aa)
Methylmalonate-semialdehyde dehydrogenase acylating {ECO:0000313|EMBL:EGF95134.1}; EC=1.2.1.27 {ECO:0000313|EMBL:EGF95134.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
Methylmalonate-semialdehyde dehydrogenase acylating n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1Z4_BREDI
SCNpilot_cont_300_bf_scaffold_2335_curated_4
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

3238..3351
DNA (114bp) protein (38aa)
Tax=RBG_16_RIF_CHLX_72_14_curated
SCNpilot_cont_300_bf_scaffold_2335_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3854..4762
DNA (909bp) protein (303aa)
LysR substrate binding domain protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQ81_BREDI
LysR substrate binding domain protein {ECO:0000313|EMBL:EKY30173.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2335_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4846..5556
DNA (711bp) protein (237aa)
Response regulator n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1Z6_BREDI
Response regulator {ECO:0000313|EMBL:EGF95136.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
two component transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2335_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5577..6938
DNA (1362bp) protein (454aa)
LysM domain protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QR53_BREDI
LysM domain protein {ECO:0000313|EMBL:EKY30175.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
peptidoglycan binding domain-containing protein rbh
SCNpilot_cont_300_bf_scaffold_2335_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6943..9222
DNA (2280bp) protein (760aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1Z8_BREDI
multi-sensor signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_2335_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9241..9555)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1Z9_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95139.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_2335_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10214..11317)
DNA (1104bp) protein (368aa)
General secretion pathway protein L n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQ91_BREDI
General secretion pathway protein L {ECO:0000313|EMBL:EKY30179.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
xcsL; type II secretion system protein L; K02461 general secretion pathway protein L
SCNpilot_cont_300_bf_scaffold_2335_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11328..12314)
DNA (987bp) protein (329aa)
Type II secretion system protein K n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2X1_BREDI
Type II secretion system protein K {ECO:0000256|PIRNR:PIRNR002786}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
xcsK; type II secretion system protein K; K02460 general secretion pathway protein K
SCNpilot_cont_300_bf_scaffold_2335_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12311..12862)
DNA (552bp) protein (184aa)
General secretion pathway protein J n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQH5_BREDI
General secretion pathway protein J {ECO:0000313|EMBL:EKY30181.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
xcsJ; type II secretion system protein J; K02459 general secretion pathway protein J
SCNpilot_cont_300_bf_scaffold_2335_curated_13
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12952..13317)
DNA (366bp) protein (122aa)
General secretion pathway protein I n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R201_BREDI
General secretion pathway protein I {ECO:0000313|EMBL:EGF95141.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
type II secretion system protein I; K02458 general secretion pathway protein I
SCNpilot_cont_300_bf_scaffold_2335_curated_14
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13310..13699)
DNA (390bp) protein (130aa)
General secretion pathway protein H n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R202_BREDI
General secretion pathway protein H {ECO:0000313|EMBL:EGF95142.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
xcsH; type II secretion system protein H; K02457 general secretion pathway protein H
SCNpilot_cont_300_bf_scaffold_2335_curated_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13869..14282)
DNA (414bp) protein (138aa)
General secretion pathway protein G n=2 Tax=Brevundimonas diminuta RepID=L1QQA9_BREDI
General secretion pathway protein G {ECO:0000313|EMBL:EKY30111.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
xcsG; type II secretion system protein G; K02456 general secretion pathway protein G
SCNpilot_cont_300_bf_scaffold_2335_curated_16
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14438..14998)
DNA (561bp) protein (187aa)
General secretion pathway protein F n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QRD1_BREDI
General secretion pathway protein F {ECO:0000313|EMBL:EKY30112.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
pulF; type II secretion pathway protein F; K02455 general secretion pathway protein F
SCNpilot_cont_300_bf_scaffold_2335_curated_17
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15649..15837)
DNA (189bp) protein (63aa)
General secretory pathway protein E n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R206_BREDI
General secretory pathway protein E {ECO:0000313|EMBL:EGF95146.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
xcsE; type II secretion system protein E; K02454 general secretion pathway protein E
SCNpilot_cont_300_bf_scaffold_2335_curated_18
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16993..19113)
DNA (2121bp) protein (707aa)
General secretion pathway protein D n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQ25_BREDI
General secretion pathway protein D {ECO:0000313|EMBL:EKY30114.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
pulD; type II secretion pathway protein D; K02453 general secretion pathway protein D
SCNpilot_cont_300_bf_scaffold_2335_curated_19
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19110..19967)
DNA (858bp) protein (286aa)
Putative general secretion pathway protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQY5_BREDI
Putative general secretion pathway protein {ECO:0000313|EMBL:EKY30115.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
xcsC; type II secretion system protein C; K02452 general secretion pathway protein C
SCNpilot_cont_300_bf_scaffold_2335_curated_20
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20182..20808)
DNA (627bp) protein (209aa)
TonB dependent receptor family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R209_BREDI
TonB dependent receptor family protein {ECO:0000313|EMBL:EGF95149.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
TonB-dependent receptor plug
Displaying 20 items

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