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SCNpilot_bf_inoc_scaffold_2869_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_2869_curated_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(125..1102)
DNA (978bp) protein (326aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
tRNA dimethylallyltransferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75]
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037E148E
SCNpilot_bf_inoc_scaffold_2869_curated_2
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1080..2282)
DNA (1203bp) protein (401aa)
Drug resistance transporter, Bcr/CflA subfamily n=1 Tax=Polaromonas sp. CF318 RepID=J3D0D1_9BURK
Drug resistance transporter, Bcr/CflA subfamily {ECO:0000313|EMBL:EJL82149.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
Bcr/CflA subfamily drug resistance transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein
SCNpilot_bf_inoc_scaffold_2869_curated_3
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2387..4198)
DNA (1812bp) protein (604aa)
DNA mismatch repair protein MutL n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y3P5_RAMTT
mutL; DNA mismatch repair protein mutL; K03572 DNA mismatch repair protein MutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_2869_curated_4
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4263..4895
DNA (633bp) protein (211aa)
SNARE associated Golgi protein-like protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q194_ACIAP
hypothetical protein; K03975 membrane-associated protein
SNARE associated Golgi protein-like protein {ECO:0000313|EMBL:ADX45242.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
SCNpilot_bf_inoc_scaffold_2869_curated_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4964..6304)
DNA (1341bp) protein (447aa)
n-acetylmuramoyl-l-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MEP0_ACIET
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_bf_inoc_scaffold_2869_curated_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6301..6810)
DNA (510bp) protein (170aa)
Putative ATPase, YjeE family n=1 Tax=Variovorax paradoxus B4 RepID=T1XDM8_VARPD
putative ATPase, YjeE family
Putative ATPase, YjeE family {ECO:0000313|EMBL:AGU50653.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_bf_inoc_scaffold_2869_curated_7
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6829..7887
DNA (1059bp) protein (353aa)
Epoxyqueuosine reductase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y3N8_RAMTT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
SCNpilot_bf_inoc_scaffold_2869_curated_8
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8064..8981)
DNA (918bp) protein (306aa)
Auxin Efflux Carrier n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VLG1_POLNA
auxin efflux carrier; K07088
Auxin Efflux Carrier {ECO:0000313|EMBL:ABM36489.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_bf_inoc_scaffold_2869_curated_9
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9092..10057
DNA (966bp) protein (322aa)
ABC transporter substrate-binding protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00035F9BEA
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJA09327.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_2869_curated_10
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10254..11150
DNA (897bp) protein (299aa)
tyrosine recombinase XerD n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002E000B5
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
tyrosine recombinase XerD; K04763 integrase/recombinase XerD
SCNpilot_bf_inoc_scaffold_2869_curated_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11204..12001
DNA (798bp) protein (266aa)
Glycosyl transferase family 2 n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CK71_VARPS
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACS17169.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
Displaying 11 items

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