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SCNpilot_bf_inoc_scaffold_8971_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_8971_curated_1
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..311)
DNA (309bp) protein (103aa)
Putative TetR-family transcriptional regulator n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCX8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL31056.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative TetR-family transcriptional regulator
SCNpilot_bf_inoc_scaffold_8971_curated_2
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1226..1456
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V3P2_9RHIZ
3',5'-cyclic-nucleotide phosphodiesterase {ECO:0000313|EMBL:KFC66266.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
3',5'-cyclic-nucleotide phosphodiesterase
SCNpilot_bf_inoc_scaffold_8971_curated_3
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1470..2759
DNA (1290bp) protein (430aa)
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCY0_PELHB
Glycerol-3-phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB12298.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_bf_inoc_scaffold_8971_curated_4
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2813..3748
DNA (936bp) protein (312aa)
SN-glycerol-3-phosphate transport system permease protein UgpA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCY2_PELHB
Glycerol-3-phosphate ABC transporter, permease pro tein UgpA {ECO:0000313|EMBL:CDP51545.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
SN-glycerol-3-phosphate transport system permease protein UgpA; K02025 multiple sugar transport system permease protein
SCNpilot_bf_inoc_scaffold_8971_curated_5
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4681..5277
DNA (597bp) protein (199aa)
Protein tyrosine/serine phosphatase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCY4_PELHB
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:CDP51547.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
protein tyrosine/serine phosphatase
SCNpilot_bf_inoc_scaffold_8971_curated_6
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6149..6343
DNA (195bp) protein (65aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000256|HAMAP-Rule:MF_01727}; EC=3.6.3.20 {ECO:0000256|HAMAP-Rule:MF_01727};; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCNpilot_bf_inoc_scaffold_8971_curated_7
unknown

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6513..6626
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying 7 items

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