name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_650_curated_1
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
84..575
|
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12J).;"
Lipoprotein signal peptidase n=2 Tax=Ralstonia pickettii RepID=B2UAQ5_RALPJ
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_2
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
707..1969
|
dfp; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5]
phosphopantothenate synthase n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI000380716B
Phosphopantothenate synthase {ECO:0000313|EMBL:ESJ26069.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_3
unknown
|
Not on your lists |
1983..2519
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_650_curated_4 |
Not on your lists |
2516..2965
|
Deoxyuridine 5'-triphosphate nucleotidohydrolase (DUTPase) (DUTP pyrophosphatase) {ECO:0000313|EMBL:CBH96974.1}; EC=3.6.1.23 {ECO:0000313|EMBL:CBH96974.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23]
Deoxyuridine 5'-triphosphate nucleotidohydrolase (DUTPase) (DUTP pyrophosphatase) n=1 Tax=mine drainage metagenome RepID=E6PPX1_9ZZZZ
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_5
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3000..3461
|
Flavodoxin/nitric oxide synthase n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B6K7_9BURK
Flavodoxin {ECO:0000313|EMBL:KGG89906.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
putative oxidoreductase
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_6
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(3492..4430)
|
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|SAAS:SAAS00118670};; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
Transaldolase n=2 Tax=unclassified Opitutaceae RepID=H1IPT6_9BACT
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_7
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4474..5055)
|
Disulfide bond formation protein B n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IKX6_BORPD
dsbB; disulfide bond formation protein B; K03611 disulfide bond formation protein DsbB
Disulfide bond formation protein B {ECO:0000313|EMBL:CAP42506.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_8
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5086..6411)
|
flavocytochrome C sulfide dehydrogenase n=1 Tax=Methyloversatilis universalis RepID=UPI0003629125
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_9
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6435..6770)
|
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000379B32F
cytochrome c
Putative cytochrome c {ECO:0000313|EMBL:ABM95383.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_10
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7128..9437)
|
ATP-dependent Clp protease ATP-binding subunit ClpA n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RWY6_9BURK
ATP-dependent Clp protease ATP-binding subunit ClpA {ECO:0000313|EMBL:EFV95058.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
clpA; ATP-dependent protease ATP-binding specificity subunit; K03694 ATP-dependent Clp protease ATP-binding subunit ClpA
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9434..9742)
|
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RWY7_9BURK
ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_12
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10080..10283
|
Cold-shock DNA-binding domain protein n=3 Tax=Herbaspirillum RepID=D8IP93_HERSS
cspD; cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family)
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADJ62913.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_13
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10439..11668)
|
Carnitine dehydratase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QWN0_9BURK
Carnitine dehydratase {ECO:0000313|EMBL:ETF03763.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11680..13953)
|
Putative acyl-CoA dehydrogenase-like n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z426_9BRAD
putative acyl-CoA dehydrogenase-like
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14021..14992)
|
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI00036D1168
putative Bug-like extracytoplasmic solute binding receptor, TTT family
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_16
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15089..16228)
|
Urocanate hydratase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H8G0_9BRAD
Urocanate hydratase {ECO:0000313|EMBL:ERF81028.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
putative acyl-CoA dehydrogenase fadE25
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16355..17158
|
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000371A54B
enoyl-CoA hydratase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_18
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17160..17966
|
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037D1D9F
Uncharacterized protein {ECO:0000313|EMBL:ERF81027.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
Pyruvate dehydrogenase, putative
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17979..18818)
|
CoA enzyme activase id=1781275 bin=GWD2_Deltaproteobacteria_55_8 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
CoA-substrate-specific enzyme activase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18853..19644)
|
CoA-substrate-specific enzyme activase id=14627370 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
CoA-substrate-specific enzyme activase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19641..21008)
|
2-hydroxyglutaryl-CoA dehydratase subunit D; K04113 benzoyl-CoA reductase subunit [EC:1.3.7.8]
Benzoyl-CoA reductase, subunit B id=1781271 bin=GWD2_Deltaproteobacteria_55_8 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21005..22228)
|
Putative Benzoyl-CoA reductase, subunit C id=1781270 bin=GWD2_Deltaproteobacteria_55_8 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
|
|
SCNpilot_expt_1000_bf_scaffold_650_curated_23
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22513..23478
|
Extra-cytoplasmatic solute receptor n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LBR6_RALME
bug; ABC transporter substrate-binding protein
Extra-cytoplasmatic solute receptor {ECO:0000313|EMBL:ABF12410.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
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SCNpilot_expt_1000_bf_scaffold_650_curated_24
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23534..24754)
|
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z542_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM88142.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
|
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SCNpilot_expt_1000_bf_scaffold_650_curated_25
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24897..25742)
|
Transcriptional regulator, GntR family n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TTK7_9BRAD
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCE09795.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
transcriptional regulator, GntR family
|
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SCNpilot_expt_1000_bf_scaffold_650_curated_26
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25761..26576)
|
Putative transcriptional regulator, GntR-family (HTH) n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LBT6_RALME
GntR family transcriptional regulator
Putative transcriptional regulator, GntR-family (HTH) {ECO:0000313|EMBL:ABF12390.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
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SCNpilot_expt_1000_bf_scaffold_650_curated_27
Pseudomonas sp. GM78, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26818..27942
|
ada; bifunctional DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase (EC:2.1.1.63); K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
O-6-methylguanine DNA methyltransferase n=1 Tax=Pseudomonas sp. GM78 RepID=J3I8V4_9PSED
O-6-methylguanine DNA methyltransferase {ECO:0000313|EMBL:EJN18488.1}; TaxID=1144337 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM78.;"
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SCNpilot_expt_1000_bf_scaffold_650_curated_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27946..29439)
|
Major facilitator superfamily MFS_1 n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BZQ8_DELAS
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABX35966.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
|
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SCNpilot_expt_1000_bf_scaffold_650_curated_29
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29530..30501
|
Transcriptional regulator, LysR family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AX35_DELSC
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEF90433.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
|
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SCNpilot_expt_1000_bf_scaffold_650_curated_30
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30498..31631)
|
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037CCF5C
Metallo-beta-lactamase {ECO:0000313|EMBL:GAD22327.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
rbh
|