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SCNpilot_expt_1000_bf_scaffold_1682_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1682_curated_1
Aciduliprofundum sp. MAR08-339, Aciduliprofundum, Euryarchaeota, Archaea

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2..211
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036D4A15
methylmalonyl-CoA mutase family protein
Methylmalonyl-CoA mutase family protein {ECO:0000313|EMBL:AGB05042.1}; TaxID=673860 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum sp. (strain MAR08-339).;"
SCNpilot_expt_1000_bf_scaffold_1682_curated_2
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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226..1761
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037B5C84
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:AGL00665.1}; Flags: Precursor;; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
SCNpilot_expt_1000_bf_scaffold_1682_curated_3
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1758..2315)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036B1AA9
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ABI57810.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
SCNpilot_expt_1000_bf_scaffold_1682_curated_4
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

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2646..3821
DNA (1176bp) protein (392aa)
Extracellular ligand-binding receptor n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDQ1_XANP2
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCNpilot_expt_1000_bf_scaffold_1682_curated_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3853..4728
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGB4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39779.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1682_curated_6
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4721..5668
DNA (948bp) protein (316aa)
Branched-chain amino acid transport system permease protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NXG8_AZOS1
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KJR65689.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
livM; branched-chain amino acid transport system permease; K01998 branched-chain amino acid transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1682_curated_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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5672..6427
DNA (756bp) protein (252aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2EHP7_9GAMM
ABC transporter
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCNpilot_expt_1000_bf_scaffold_1682_curated_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6408..7151
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036DA16E
Uncharacterized protein {ECO:0000313|EMBL:EKS39782.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_1682_curated_9
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7190..7765)
DNA (576bp) protein (192aa)
Putative transcriptional regulator n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A5S7_ALKEH
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ABI57810.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
SCNpilot_expt_1000_bf_scaffold_1682_curated_10
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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8097..10196
DNA (2100bp) protein (700aa)
N-methylhydantoinase A/acetone carboxylase, beta subunit n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KG70_9FIRM
N-methylhydantoinase A/acetone carboxylase, beta subunit
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
SCNpilot_expt_1000_bf_scaffold_1682_curated_11
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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10193..11911
DNA (1719bp) protein (573aa)
N-methylhydantoinase B/acetone carboxylase, alpha subunit n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KBU6_9FIRM
N-methylhydantoinase B/acetone carboxylase, alpha subunit
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
SCNpilot_expt_1000_bf_scaffold_1682_curated_12
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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11908..13377
DNA (1470bp) protein (490aa)
Predicted protein n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=D5ZX03_9ACTO
Predicted protein {ECO:0000313|EMBL:EFE65113.2}; TaxID=566461 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATCC 14672.;"
purine-cytosine permease-like transporter; K10974 cytosine permease
SCNpilot_expt_1000_bf_scaffold_1682_curated_13
unknown

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13411..13536
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 13 items

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