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SCNpilot_expt_500_p_scaffold_1004_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_p_scaffold_1004_curated_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..321)
DNA (321bp) protein (107aa)
Transposase, IS4 family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WIN8_9SYNE
Uncharacterized protein {ECO:0000313|EMBL:AIL12670.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
transposase
SCNpilot_expt_500_p_scaffold_1004_curated_2
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(375..782)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Glaciecola polaris LMG 21857 RepID=K6YHD1_9ALTE
transposase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_expt_500_p_scaffold_1004_curated_3
R_Gammaproteobacteria_37_14, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

886..2178
DNA (1293bp) protein (431aa)
integrase n=1 Tax=Diplorickettsia massiliensis RepID=UPI00029AE19C
Site specific recombinase, phage integrase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_37_14_curated
SCNpilot_expt_500_p_scaffold_1004_curated_4
unknown

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comp(2340..2804)
DNA (465bp) protein (155aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1004_curated_5
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(3047..4423)
DNA (1377bp) protein (459aa)
Papain family cysteine protease id=4222959 bin=GWA2__Bacteriovorax-rel_49_15 species=Raphidiopsis brookii genus=Raphidiopsis taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWA2_Bdellovibrionales_49_15_curated
SCNpilot_expt_500_p_scaffold_1004_curated_6
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(4604..5884)
DNA (1281bp) protein (427aa)
Small GTP-binding protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G5F4_9CYAN
Small GTP-binding protein {ECO:0000313|EMBL:CBN57844.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1004_curated_7
unknown

Not on your lists

comp(6088..7227)
DNA (1140bp) protein (380aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1004_curated_8
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7422..9737)
DNA (2316bp) protein (772aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERJ5_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE05847.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_expt_500_p_scaffold_1004_curated_9
Dictyostelium discoideum, Dictyostelium, Dictyosteliida, Eukaryota

Not on your lists

9929..12850
DNA (2922bp) protein (974aa)
Ankyrin repeat-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q1ZXJ5_DICDI
ankyrin repeat-containing protein
Ankyrin repeat-containing protein {ECO:0000313|EMBL:EAS66892.1}; TaxID=44689 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium discoideum (Slime mold).;"
SCNpilot_expt_500_p_scaffold_1004_curated_10
unknown

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comp(12954..13781)
DNA (828bp) protein (276aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1004_curated_11
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13936..15357)
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B514
Uncharacterized protein {ECO:0000313|EMBL:AIK96604.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1004_curated_12
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15359..16033)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B76E
plasmid pRiA4b ORF-3 family protein
Plasmid pRiA4b ORF-3 family protein {ECO:0000313|EMBL:AEM46955.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
SCNpilot_expt_500_p_scaffold_1004_curated_13
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16690..18540)
DNA (1851bp) protein (617aa)
ankyrin and tpr repeat domain protein n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225A8E7
Uncharacterized protein {ECO:0000313|EMBL:AIK96338.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_p_scaffold_1004_curated_14

Not on your lists

comp(18834..20102)
DNA (1269bp) protein (423aa)
Tetratricopeptide repeat protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2EIG3_9BACT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EKE09983.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_500_p_scaffold_1004_curated_15
unknown

Not on your lists

20346..20612
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1004_curated_16
unknown

Not on your lists

20698..21483
DNA (786bp) protein (262aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1004_curated_17
unknown

Not on your lists

21519..22340
DNA (822bp) protein (274aa)

This feature has no annotations

SCNpilot_expt_500_p_scaffold_1004_curated_18
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22445..22723
DNA (279bp) protein (93aa)
Transposase IS3/IS911 family protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y3K1_9SPHI
Transposase {ECO:0000313|EMBL:AIL13844.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
transposase IS3/IS911 family protein
SCNpilot_expt_500_p_scaffold_1004_curated_19
unknown

Not on your lists

comp(22735..23064)
DNA (330bp) protein (110aa)

This feature has no annotations

Displaying 19 items

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