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scnpilot_cont_500_p_scaffold_550_curated

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Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_550_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

632..1003
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WGM1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KFJ11113.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein
scnpilot_cont_500_p_scaffold_550_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1050..2090)
DNA (1041bp) protein (347aa)
Iron complex transport system permease n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XGM4_DELAC
Iron complex transport system permease {ECO:0000313|EMBL:EPD38874.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
transport system permease; K02015 iron complex transport system permease protein
scnpilot_cont_500_p_scaffold_550_curated_3
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2087..3163)
DNA (1077bp) protein (359aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AZF1_DELSC
Iron complex transport system permease {ECO:0000313|EMBL:EZP53271.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
ABC transporter permease; K02015 iron complex transport system permease protein
scnpilot_cont_500_p_scaffold_550_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3167..4177)
DNA (1011bp) protein (337aa)
Periplasmic binding protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BU73_DELAS
iron-enterobactin transporter periplasmic-binding protein; K02016 iron complex transport system substrate-binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ABX35788.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_550_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4297..5112
DNA (816bp) protein (272aa)
iron-chelate-transporting ATPase (EC:3.6.3.34); K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
Iron complex transport system ATP-binding protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X1F5_DELAC
Iron complex transport system ATP-binding protein {ECO:0000313|EMBL:EPD38877.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_550_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5143..6045)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WGM5_DELAC
IclR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EPD38878.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_550_curated_7
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6107..8242
DNA (2136bp) protein (712aa)
TonB-dependent receptor n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BU70_DELAS
TonB-dependent receptor {ECO:0000313|EMBL:EZP53275.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
TonB-dependent receptor
scnpilot_cont_500_p_scaffold_550_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8250..9572
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WL48_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38880.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
nitrilotriacetate monooxygenase family FMN-dependent oxidoreductase
scnpilot_cont_500_p_scaffold_550_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9600..10295)
DNA (696bp) protein (232aa)
Two component transcriptional regulator, winged helix family n=3 Tax=Delftia acidovorans RepID=A9BU68_DELAS
two component transcriptional regulator; K07664 two-component system, OmpR family, response regulator BaeR
Two-component system, OmpR family, response regulator BaeR {ECO:0000313|EMBL:EPD38881.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_550_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10292..11953)
DNA (1662bp) protein (554aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
histidine kinase; K07642 two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
Two-component system, OmpR family, sensor histidine kinase BaeS n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WZZ9_DELAC
scnpilot_cont_500_p_scaffold_550_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11966..12892)
DNA (927bp) protein (309aa)
Intradiol ring-cleavage dioxygenase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BU66_DELAS
intradiol ring-cleavage dioxygenase
Intradiol ring-cleavage dioxygenase {ECO:0000313|EMBL:ABX35781.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_550_curated_12
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12976..13275)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00036ADE16
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP53280.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
scnpilot_cont_500_p_scaffold_550_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13404..13847
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00037116C9
Uncharacterized protein {ECO:0000313|EMBL:EPD38885.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_550_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13891..14874)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X005_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38372.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_550_curated_15
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14952..16130)
DNA (1179bp) protein (393aa)
fomryl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase {ECO:0000313|EMBL:AEF90574.1}; EC=2.8.3.16 {ECO:0000313|EMBL:AEF90574.1};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
Formyl-CoA transferase n=2 Tax=Bacteria RepID=F6AZG5_DELSC
scnpilot_cont_500_p_scaffold_550_curated_16
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16127..17080)
DNA (954bp) protein (318aa)
hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4); K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:AEF90575.1}; EC=4.1.3.4 {ECO:0000313|EMBL:AEF90575.1};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
3-hydroxy-3-methylglutaryl-CoA lyase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002FF1386
scnpilot_cont_500_p_scaffold_550_curated_17
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17195..18118
DNA (924bp) protein (308aa)
Transcriptional regulator, LysR family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AZG7_DELSC
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEF90576.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
scnpilot_cont_500_p_scaffold_550_curated_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18188..18841
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WGD1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38890.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
thiosulfate reductase cytochrome b subunit
scnpilot_cont_500_p_scaffold_550_curated_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18838..19629
DNA (792bp) protein (264aa)
molybdopterin binding oxidoreductase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002D258CC
Uncharacterized protein {ECO:0000313|EMBL:EPD38891.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
molybdopterin-binding oxidoreductase; K07147
scnpilot_cont_500_p_scaffold_550_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19734..20033
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WF45_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38892.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
pentapeptide MXKDX repeat-containing protein
scnpilot_cont_500_p_scaffold_550_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20175..20441)
DNA (267bp) protein (89aa)
Translation initiation factor IF-1 n=2 Tax=Delftia acidovorans RepID=S2WGN7_DELAC
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
translation initiation factor IF-1; K02518 translation initiation factor IF-1
scnpilot_cont_500_p_scaffold_550_curated_22
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20763..20921)
DNA (159bp) protein (53aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AZH2_DELSC
Uncharacterized protein {ECO:0000313|EMBL:EZP53292.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_550_curated_23
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20931..22319)
DNA (1389bp) protein (463aa)
gluconate transporter n=1 Tax=Chryseobacterium taeanense RepID=UPI00031DAB52
Gluconate transporter {ECO:0000313|EMBL:EZP53293.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
gluconate transporter; K03299 gluconate:H+ symporter, GntP family
scnpilot_cont_500_p_scaffold_550_curated_24
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22489..23268
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WGD7_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KEH08222.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
DNA polymerase beta domain-containing protein
scnpilot_cont_500_p_scaffold_550_curated_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23396..24385
DNA (990bp) protein (330aa)
LacI family transcriptional regulator n=1 Tax=Chryseobacterium taeanense RepID=UPI0003170232
Uncharacterized protein {ECO:0000313|EMBL:EPD38900.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
LacI family transcriptional regulator
scnpilot_cont_500_p_scaffold_550_curated_26
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24466..25491
DNA (1026bp) protein (342aa)
ABC transporter substrate-binding protein n=1 Tax=Chryseobacterium taeanense RepID=UPI00031D9802
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEH12059.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
extracellular solute-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein
scnpilot_cont_500_p_scaffold_550_curated_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25488..26345
DNA (858bp) protein (286aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BU46_DELAS
binding-protein-dependent transport system inner membrane protein; K02053 putative spermidine/putrescine transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABX35761.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_550_curated_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26453..27232
DNA (780bp) protein (260aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WGP9_DELAC
binding-protein-dependent transport system inner membrane protein; K02053 putative spermidine/putrescine transport system permease protein
Uncharacterized protein {ECO:0000313|EMBL:EPD38903.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_550_curated_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27222..28283
DNA (1062bp) protein (354aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=S2WJT1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD38904.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein
scnpilot_cont_500_p_scaffold_550_curated_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28270..29130
DNA (861bp) protein (287aa)
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA {ECO:0000256|HAMAP-Rule:MF_00905}; Short=3',5'-cyclic AMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; Short=cAMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; EC=3.1.4.17 {ECO:0000256|HAMAP-Rule:MF_00905};; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WGE6_DELAC
metallophosphoesterase
Displaying items 1-30 of 48 in total

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