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scnpilot_cont_500_p_scaffold_6649_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_6649_curated_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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112..1170
DNA (1059bp) protein (353aa)
Transposase, IS4 family n=2 Tax=Comamonadaceae RepID=A1W269_ACISJ
transposase, IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ADV00200.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_cont_500_p_scaffold_6649_curated_2
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1482..2150)
DNA (669bp) protein (223aa)
Uncharacterized protein n=4 Tax=cellular organisms RepID=A9BTP4_DELAS
hypothetical protein; K09765 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ46199.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
scnpilot_cont_500_p_scaffold_6649_curated_3
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2147..2647)
DNA (501bp) protein (167aa)
Transcriptional regulator, LysR family n=4 Tax=Burkholderiales RepID=A9BTP5_DELAS
metR; DNA-binding protein transcriptional activator, homocysteine-binding protein; K03576 LysR family transcriptional regulator, regulator for metE and metH
DNA-binding protein {ECO:0000313|EMBL:AIJ46198.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
scnpilot_cont_500_p_scaffold_6649_curated_4
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2688..4226)
DNA (1539bp) protein (513aa)
Integrase catalytic region n=3 Tax=Burkholderiales RepID=A9BTP6_DELAS
Transposase ISRme17 {ECO:0000313|EMBL:ABF09864.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
integrase catalytic subunit
scnpilot_cont_500_p_scaffold_6649_curated_5
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4682..5584)
DNA (903bp) protein (301aa)
Phosphonate dehydrogenase (NAD-dependent phosphite dehydrogenase) {ECO:0000313|EMBL:ABF09865.1}; EC=1.20.1.1 {ECO:0000313|EMBL:ABF09865.1};; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=3 Tax=Burkholderiales RepID=A9BTP7_DELAS
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
scnpilot_cont_500_p_scaffold_6649_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5674..6474)
DNA (801bp) protein (267aa)
Phosphonate ABC transporter, inner membrane subunit n=3 Tax=Burkholderiales RepID=A9BTP8_DELAS
phosphonate ABC transporter inner membrane subunit; K02042 phosphonate transport system permease protein
Phosphonate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABX35312.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_cont_500_p_scaffold_6649_curated_7
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6471..7349)
DNA (879bp) protein (293aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein n=3 Tax=Burkholderiales RepID=A9BTP9_DELAS
phosphonate ABC transporter periplasmic phosphonate-binding protein; K02044 phosphonate transport system substrate-binding protein
Phosphite transport system-binding protein ptxB {ECO:0000313|EMBL:ABF09867.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
scnpilot_cont_500_p_scaffold_6649_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7343..8182)
DNA (840bp) protein (280aa)
phosphonate ABC transporter ATPase; K02041 phosphonate transport system ATP-binding protein [EC:3.6.3.28]
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Phosphonates import ATP-binding protein PhnC 2 n=3 Tax=Burkholderiales RepID=PHNC2_RALME rbh
scnpilot_cont_500_p_scaffold_6649_curated_9
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8417..9241
DNA (825bp) protein (275aa)
Transcriptional regulator, LysR family n=3 Tax=Burkholderiales RepID=A9BTQ1_DELAS
LysR family transcriptional regulator
Transcriptional regulator, LysR family , acts on the phosphonate ptx genes {ECO:0000313|EMBL:ABF09869.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
scnpilot_cont_500_p_scaffold_6649_curated_10
Shewanella decolorationis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9813..10049)
DNA (237bp) protein (79aa)
transposase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003700809
transposase Tn3 family protein
Transposase Tn3 family protein {ECO:0000313|EMBL:ESE41428.1}; TaxID=1353536 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella decolorationis S12.;"
Displaying 10 items

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