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scnpilot_cont_500_p_scaffold_300_curated

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Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_300_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1110)
DNA (1110bp) protein (370aa)
glucarate dehydratase (EC:4.2.1.40); K01706 glucarate dehydratase [EC:4.2.1.40]
Glucarate dehydratase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WI30_DELAC
Glucarate dehydratase {ECO:0000313|EMBL:EPD37820.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_300_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1156..2145)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XDB8_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37819.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
scnpilot_cont_500_p_scaffold_300_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2266..3225)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WDJ6_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37818.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_300_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3284..4195)
DNA (912bp) protein (304aa)
Probable 5-dehydro-4-deoxyglucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; EC=4.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00694};; 5-keto-4-deoxy-glucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
5-dehydro-4-deoxyglucarate dehydratase (EC:4.2.1.41); K01707 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41]
Probable 5-dehydro-4-deoxyglucarate dehydratase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XVD4_DELAC
scnpilot_cont_500_p_scaffold_300_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4241..5218)
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Delftia RepID=S2WUJ6_DELAC
hypothetical protein
Tripartite tricarboxylate transporter receptor family protein {ECO:0000313|EMBL:KFJ13494.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
scnpilot_cont_500_p_scaffold_300_curated_6
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5394..6182)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XE25_DELAC
GntR family transcriptional regulator {ECO:0000313|EMBL:KEH07384.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
GntR family transcriptional regulator
scnpilot_cont_500_p_scaffold_300_curated_7
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6270..7586
DNA (1317bp) protein (439aa)
mandelate racemase/muconate lactonizing protein; K01706 glucarate dehydratase [EC:4.2.1.40]
Glucarate dehydratase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WVL4_DELAC
Glucarate dehydratase {ECO:0000313|EMBL:KEH12407.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
scnpilot_cont_500_p_scaffold_300_curated_8
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7634..8632
DNA (999bp) protein (333aa)
MFS transporter n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E7CBC2
MFS transporter {ECO:0000313|EMBL:KEH07386.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_300_curated_9
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8821..10386
DNA (1566bp) protein (522aa)
Galactarate dehydrogenase {ECO:0000313|EMBL:KEH07387.1}; EC=4.2.1.42 {ECO:0000313|EMBL:KEH07387.1};; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
galactarate dehydratase (EC:4.2.1.42); K01708 galactarate dehydratase [EC:4.2.1.42]
Galactarate dehydratase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XVC9_DELAC
scnpilot_cont_500_p_scaffold_300_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10457..11443
DNA (987bp) protein (329aa)
Membrane protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WEU9_DELAC
Membrane protein {ECO:0000313|EMBL:EPD37811.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
ribonuclease BN; K07058 membrane protein
scnpilot_cont_500_p_scaffold_300_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11567..12505
DNA (939bp) protein (313aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WI20_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37810.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_300_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12726..13589
DNA (864bp) protein (288aa)
Branched-chain amino acid transport system permease n=3 Tax=Bacteria RepID=S2WVK9_DELAC
Branched-chain amino acid transport system permease {ECO:0000313|EMBL:EPD37809.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
scnpilot_cont_500_p_scaffold_300_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13590..14564
DNA (975bp) protein (325aa)
ABC transporter permease n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E27206
Branched-chain amino acid transport system permease {ECO:0000313|EMBL:EPD37808.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
scnpilot_cont_500_p_scaffold_300_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14551..15315
DNA (765bp) protein (255aa)
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XVC3_DELAC
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:EPD43469.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein
scnpilot_cont_500_p_scaffold_300_curated_15
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15302..16009
DNA (708bp) protein (236aa)
monosaccharide-transporting ATPase (EC:3.6.3.17); K01996 branched-chain amino acid transport system ATP-binding protein
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:AEF87307.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AEF87307.1};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
Monosaccharide-transporting ATPase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B1I4_DELSC
scnpilot_cont_500_p_scaffold_300_curated_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16187..17362
DNA (1176bp) protein (392aa)
Branched-chain amino acid transport system substrate-binding protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XE15_DELAC
Branched-chain amino acid transport system substrate-binding protein {ECO:0000313|EMBL:EPD43467.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
scnpilot_cont_500_p_scaffold_300_curated_17
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17492..17773
DNA (282bp) protein (94aa)
Plasmid maintenance system killer n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AKU7_DELSC
plasmid maintenance system killer protein; K07334 proteic killer suppression protein
Plasmid maintenance system killer {ECO:0000313|EMBL:AEF87309.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
scnpilot_cont_500_p_scaffold_300_curated_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17816..18115
DNA (300bp) protein (100aa)
Plasmid maintenance system antidote protein, XRE family n=3 Tax=Delftia RepID=F6AKU8_DELSC
Addiction module antidote protein, HigA family {ECO:0000313|EMBL:KFJ13665.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
XRE family transcriptional regulator
scnpilot_cont_500_p_scaffold_300_curated_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18208..18981)
DNA (774bp) protein (258aa)
short-chain dehydrogenase/reductase SDR; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69]
Short-chain dehydrogenase/reductase SDR n=2 Tax=Delftia RepID=A9BQV7_DELAS
Short chain dehydrogenase family protein {ECO:0000313|EMBL:KFJ13826.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
scnpilot_cont_500_p_scaffold_300_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19115..19921)
DNA (807bp) protein (269aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WET9_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43463.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
IclR family transcriptional regulator
scnpilot_cont_500_p_scaffold_300_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19966..20739)
DNA (774bp) protein (258aa)
oxidoreductase FAD-binding subunit; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2]
Ferredoxin-NADP+ reductase n=2 Tax=Delftia acidovorans RepID=S2WI12_DELAC
Ferredoxin-NADP+ reductase {ECO:0000313|EMBL:EPD37800.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_cont_500_p_scaffold_300_curated_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21001..21936)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XDA4_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37799.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_300_curated_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22030..22821
DNA (792bp) protein (264aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQW1_DELAS
Short chain dehydrogenase family protein {ECO:0000313|EMBL:KFJ13753.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
short-chain dehydrogenase/reductase SDR
scnpilot_cont_500_p_scaffold_300_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22839..23120)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI000315D8BC
Uncharacterized protein {ECO:0000313|EMBL:EPD43459.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_300_curated_25
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23117..24844)
DNA (1728bp) protein (576aa)
peptidase n=1 Tax=Chryseobacterium taeanense RepID=UPI000311F5D2
Uncharacterized protein {ECO:0000313|EMBL:EPD43458.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
PepSY-associated TM helix domain-containing protein
scnpilot_cont_500_p_scaffold_300_curated_26
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24841..25167)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XE04_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43457.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_300_curated_27
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25329..26189)
DNA (861bp) protein (287aa)
Transcriptional regulator, LysR family n=2 Tax=cellular organisms RepID=F6AKV7_DELSC
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EZP51964.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
scnpilot_cont_500_p_scaffold_300_curated_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26229..26888
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WZT5_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43455.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_300_curated_29
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27020..28591
DNA (1572bp) protein (524aa)
Rhodanese-like protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AKV9_DELSC
Rhodanese domain protein {ECO:0000313|EMBL:EZP51962.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
rhodanese-like protein
scnpilot_cont_500_p_scaffold_300_curated_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28798..29796
DNA (999bp) protein (333aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WES9_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD43453.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
Displaying items 1-30 of 48 in total

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