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scnpilot_p_inoc_scaffold_1105_curated

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1105_curated_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(117..563)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1E0_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91997.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1105_curated_2
unknown

Not on your lists

comp(652..1281)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003766643
scnpilot_p_inoc_scaffold_1105_curated_3
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1581..2057)
DNA (477bp) protein (159aa)
Uncharacterized protein {ECO:0000313|EMBL:KIA82423.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
scnpilot_p_inoc_scaffold_1105_curated_4
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2326..3285)
DNA (960bp) protein (320aa)
DNA primase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GU77_9BACT
DNA primase {ECO:0000313|EMBL:CCH57678.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1105_curated_5
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(3275..3580)
DNA (306bp) protein (102aa)
Plasmid stabilization system n=1 Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3EQR6_CHLPB
plasmid stabilization system
Plasmid stabilization system {ECO:0000313|EMBL:ACE04097.1}; TaxID=331678 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium phaeobacteroides (strain BS1).;"
scnpilot_p_inoc_scaffold_1105_curated_6
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3582..3827)
DNA (246bp) protein (82aa)
Putative addiction module antidote protein, CopG/Arc/MetJ family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6Z8_DYAFD
putative addiction module antidote protein, CopG/Arc/MetJ family; K07746 hypothetical protein
Putative addiction module antidote protein, CopG/Arc/MetJ family {ECO:0000313|EMBL:ACT92607.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_1105_curated_7
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4202..5140)
DNA (939bp) protein (313aa)
Plasmid encoded RepA protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GU79_9BACT
Plasmid encoded RepA protein {ECO:0000313|EMBL:CCH57680.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
plasmid encoded RepA protein
scnpilot_p_inoc_scaffold_1105_curated_8
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5239..5562)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B78E62
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42951.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_1105_curated_9
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5565..6218)
DNA (654bp) protein (218aa)
ParA n=1 Tax=Spirosoma spitsbergense RepID=UPI00036AD3AE
cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ADB42952.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_p_inoc_scaffold_1105_curated_10
unknown

Not on your lists

6313..6474
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1105_curated_11
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

6479..7360
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S1E8_THEOJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL07225.1}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
scnpilot_p_inoc_scaffold_1105_curated_12
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7371..8030)
DNA (660bp) protein (220aa)
Site-specific recombinase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GU84_9BACT
Site-specific recombinase {ECO:0000313|EMBL:CCH57685.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
resolvase
scnpilot_p_inoc_scaffold_1105_curated_13
unknown

Not on your lists

8086..8244
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1105_curated_14
Capnocytophaga sp. oral taxon 863, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8687..9262
DNA (576bp) protein (192aa)
chemical-damaging agent resistance protein C n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5B726
Bacterial stress protein {ECO:0000313|EMBL:ERI64368.1}; TaxID=1227266 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 863 str. F0517.;"
stress protein; K05795 tellurium resistance protein TerD
scnpilot_p_inoc_scaffold_1105_curated_15
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9267..9941
DNA (675bp) protein (225aa)
Tellurium resistance protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FT13_9FLAO
Tellurium resistance protein {ECO:0000313|EMBL:EIA08710.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
stress protein
scnpilot_p_inoc_scaffold_1105_curated_16
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9968..10657
DNA (690bp) protein (230aa)
dehalogenase n=1 Tax=Pedobacter agri RepID=UPI00029A463A
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:EHQ30132.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
haloacid dehalogenase domain-containing protein hydrolase; K07025 putative hydrolase of the HAD superfamily
scnpilot_p_inoc_scaffold_1105_curated_17
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10882..11502
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B603EA
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ30133.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1105_curated_18
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11492..12046
DNA (555bp) protein (185aa)
TerZ/TerD family protein, possibly involved in tellurium resistance n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z397_FLABF
TerZ/TerD family protein; K05795 tellurium resistance protein TerD
TerZ/TerD family protein, possibly involved in tellurium resistance {ECO:0000313|EMBL:CCB68210.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
scnpilot_p_inoc_scaffold_1105_curated_19
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12063..12674
DNA (612bp) protein (204aa)
Tellurium resistance protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FT07_9FLAO
Tellurium resistance protein {ECO:0000313|EMBL:EIA08704.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
stress protein; K05791 tellurium resistance protein TerZ
scnpilot_p_inoc_scaffold_1105_curated_20
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12676..13314
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z3A4_FLABF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB68217.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
scnpilot_p_inoc_scaffold_1105_curated_21
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13317..13952
DNA (636bp) protein (212aa)
tellurium resistance protein n=1 Tax=Pedobacter agri RepID=UPI00029A5BC3
Putative tellurium resistance protein (TerY-like) {ECO:0000313|EMBL:EIA08700.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1105_curated_22
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13949..14200
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034BEBB2
Putative uncharacterized protein {ECO:0000313|EMBL:EIA08699.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1105_curated_23
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14445..15491
DNA (1047bp) protein (349aa)
von Willebrand factor A n=1 Tax=Pedobacter agri RepID=UPI00029B15A2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB68221.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
scnpilot_p_inoc_scaffold_1105_curated_24
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15501..16931
DNA (1431bp) protein (477aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029B0374
Putative uncharacterized protein {ECO:0000313|EMBL:EIA08697.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1105_curated_25
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16943..18451
DNA (1509bp) protein (503aa)
kinase n=1 Tax=Pedobacter agri RepID=UPI00029B5547
putative protein kinase
Probable protein kinase {ECO:0000313|EMBL:CCB68223.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium branchiophilum (strain FL-15).;"
scnpilot_p_inoc_scaffold_1105_curated_26
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18477..19502
DNA (1026bp) protein (342aa)
Integral membrane protein, TerC family n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VND3_9SPHI
Integral membrane protein, TerC family {ECO:0000313|EMBL:EFK57430.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
integral membrane protein TerC; K05794 tellurite resistance protein TerC
scnpilot_p_inoc_scaffold_1105_curated_27
unknown

Not on your lists

19674..19841
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1105_curated_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19816..20403)
DNA (588bp) protein (196aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=K1FZM5_BACFG
Fic/DOC family protein {ECO:0000313|EMBL:EXZ45922.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
FIC family protein; K04095 cell filamentation protein
scnpilot_p_inoc_scaffold_1105_curated_29
unknown

Not on your lists

comp(20641..21123)
DNA (483bp) protein (161aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1105_curated_30
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21712..23418)
DNA (1707bp) protein (569aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00036D325E
Uncharacterized protein {ECO:0000313|EMBL:AII54559.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
TraG family mobilization protein
Displaying items 1-30 of 37 in total

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