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scnpilot_expt_750_p_scaffold_432_curated

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Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_432_curated_1
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(58..2001)
DNA (1944bp) protein (648aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X3Z4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05283.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
Domain of unknown function DUF87.
scnpilot_expt_750_p_scaffold_432_curated_2
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1986..2327)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X3Z3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05282.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
conjugative transposon protein TraF
scnpilot_expt_750_p_scaffold_432_curated_3
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2401..2700)
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8X3Z2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05281.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
conjugate transposon protein
scnpilot_expt_750_p_scaffold_432_curated_4
unknown

Not on your lists

comp(2909..3598)
DNA (690bp) protein (230aa)
hypothetical protein
scnpilot_expt_750_p_scaffold_432_curated_5
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3612..4010)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IVB8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02568.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_432_curated_6
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4010..4312)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 9_1_42FAA RepID=C3PZV7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO60856.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
scnpilot_expt_750_p_scaffold_432_curated_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4327..4755)
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9V6M1_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY90838.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
conjugate transposon protein
scnpilot_expt_750_p_scaffold_432_curated_8
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4739..5524)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis 3_1_12 RepID=E4VTW9_BACFG
Conjugal transfer protein TraA {ECO:0000313|EMBL:KJF43645.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_432_curated_9
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6660..7100
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WY49_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04413.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_432_curated_10
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7090..8322
DNA (1233bp) protein (411aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WY50_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04414.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
mobilisation protein
scnpilot_expt_750_p_scaffold_432_curated_11
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8403..10376
DNA (1974bp) protein (658aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WY52_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04416.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
mobilisation protein
scnpilot_expt_750_p_scaffold_432_curated_12
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10406..14350)
DNA (3945bp) protein (1315aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=E2NDR3_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EEF89962.1}; TaxID=537012 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus DSM 14838.;"
putative two-component system sensor kinase/response regulator fusion protein
scnpilot_expt_750_p_scaffold_432_curated_13
Alistipes sp. CAG:514, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14590..16443
DNA (1854bp) protein (618aa)
hypothetical protein n=1 Tax=Alistipes sp. JC136 RepID=UPI000287FEE2
Uncharacterized protein {ECO:0000313|EMBL:CCX52104.1}; TaxID=1262696 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:514.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_432_curated_14
Bacteroides coprophilus CAG:333, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16456..17583
DNA (1128bp) protein (376aa)
Conserved hypothetical exported protein n=1 Tax=Bacteroides coprophilus CAG:333 RepID=R6SSD5_9BACE
Conserved hypothetical exported protein {ECO:0000313|EMBL:CDC58341.1}; TaxID=1263041 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprophilus CAG:333.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_432_curated_15
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17594..18802
DNA (1209bp) protein (403aa)
G-D-S-L family lipolytic protein n=1 Tax=Alistipes sp. JC136 RepID=UPI000289C1ED
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:EGJ72012.1}; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
lipolytic enzyme, GDSL domain-containing protein
scnpilot_expt_750_p_scaffold_432_curated_16
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18845..21940
DNA (3096bp) protein (1032aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AHY6_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN23276.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
TonB-linked outer membrane receptor protein
scnpilot_expt_750_p_scaffold_432_curated_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21953..23656
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YV81_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06984.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
RagB/SusD domain-containing protein
scnpilot_expt_750_p_scaffold_432_curated_18
Streptococcus gallolyticus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23677..25293
DNA (1617bp) protein (539aa)
arabinogalactan endo-1,4-beta-galactosidase (EC:3.2.1.89); K01224 arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=981539 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus gallolyticus (strain ATCC 43143 / F-1867).;"
YvfO protein n=4 Tax=Streptococcus gallolyticus RepID=F0VV82_STRG2
scnpilot_expt_750_p_scaffold_432_curated_19
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25379..26182
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3ALE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74907.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
scnpilot_expt_750_p_scaffold_432_curated_20
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26355..28106
DNA (1752bp) protein (584aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3ALE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86306.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
scnpilot_expt_750_p_scaffold_432_curated_21
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28219..30057
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5INF0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY38251.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_432_curated_22
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

30076..31656
DNA (1581bp) protein (527aa)
Glycoside hydrolase family 37 id=4218716 bin=GWF2_Ignavibacteria_35_20 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
scnpilot_expt_750_p_scaffold_432_curated_23
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31669..34125
DNA (2457bp) protein (819aa)
glycoside hydrolase; K01190 beta-galactosidase [EC:3.2.1.23]
Uncharacterized protein n=2 Tax=Tannerella RepID=R7DKF4_9PORP
Tax=CG_Paludi_01
scnpilot_expt_750_p_scaffold_432_curated_24
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34631..35473
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J315_9PORP
Tetracycline resistance element mobilization regulatory protein rteC {ECO:0000313|EMBL:GAE86365.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;"
RteC protein.
scnpilot_expt_750_p_scaffold_432_curated_25
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35847..36164
DNA (318bp) protein (106aa)
Uncharacterized protein n=12 Tax=Bacteroidales RepID=E1WVZ2_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ86515.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
scnpilot_expt_750_p_scaffold_432_curated_26
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36468..37856
DNA (1389bp) protein (463aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WXN0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04438.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_432_curated_27
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37977..40121
DNA (2145bp) protein (715aa)
DNA topoisomerase {ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|SAAS:SAAS00046608};; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
DNA topoisomerase I subunit omega; K03169 DNA topoisomerase III [EC:5.99.1.2]
DNA topoisomerase III n=1 Tax=Bacteroides cellulosilyticus CL02T12C19 RepID=I9R133_9BACE
scnpilot_expt_750_p_scaffold_432_curated_28
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40309..40767
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WXM8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04436.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_432_curated_29
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40754..46231
DNA (5478bp) protein (1826aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X3Y1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05270.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
SNF2 family N-terminal domain protein
scnpilot_expt_750_p_scaffold_432_curated_30
unknown

Not on your lists

46265..46753
DNA (489bp) protein (163aa)

This feature has no annotations

Displaying items 1-30 of 61 in total

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