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scnpilot_expt_750_p_scaffold_387_curated

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Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_387_curated_1
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..775)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J2M7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK00070.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
scnpilot_expt_750_p_scaffold_387_curated_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(886..1422)
DNA (537bp) protein (179aa)
Uncharacterized protein n=4 Tax=Bacteroides fragilis RepID=I9KLL9_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIZ01020.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
scnpilot_expt_750_p_scaffold_387_curated_3
unknown

Not on your lists

comp(1666..2280)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000361E63E
scnpilot_expt_750_p_scaffold_387_curated_4
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2339..2917)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I8XZG1_BACOV
cAMP-binding domain-containing regulatory protein
Putative cAMP-binding domain-containing regulatory protein {ECO:0000313|EMBL:AAO77294.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
scnpilot_expt_750_p_scaffold_387_curated_5
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3005..4129)
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J2N3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK00076.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
Site-specific recombinase XerD
scnpilot_expt_750_p_scaffold_387_curated_6
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4542..4874)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Flavobacteriaceae bacterium P7-3-5 RepID=UPI000367FFDB
Uncharacterized protein {ECO:0000313|EMBL:KDN54951.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_387_curated_7
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5066..7036)
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6FIF2_9GAMM
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
scnpilot_expt_750_p_scaffold_387_curated_8
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7061..7465)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WW23_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06638.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
transcriptional regulator
scnpilot_expt_750_p_scaffold_387_curated_9
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7705..7941
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8WW24_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06639.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_387_curated_10
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8017..8469)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WW25_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06640.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
acetyltransferase
scnpilot_expt_750_p_scaffold_387_curated_11
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8559..8930)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000379BA4F
Transposase {ECO:0000313|EMBL:KFF11871.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
scnpilot_expt_750_p_scaffold_387_curated_12
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8887..9318)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000362ADA3
Transposase {ECO:0000313|EMBL:KFF23458.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_387_curated_13
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9607..11484)
DNA (1878bp) protein (626aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8WW26_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06641.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_387_curated_14
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11892..12887)
DNA (996bp) protein (332aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8WW27_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06642.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_387_curated_15
unknown

Not on your lists

12942..13097
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_387_curated_16
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13284..14261)
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8WW27_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06642.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_387_curated_17
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14424..14912)
DNA (489bp) protein (163aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
ribonucleoside-triphosphate reductase class III activase subunit (EC:1.17.4.2); K04068 anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WW29_9PORP
scnpilot_expt_750_p_scaffold_387_curated_18
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14905..17112)
DNA (2208bp) protein (736aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2); K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2]
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WW30_9PORP
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EGK06645.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_387_curated_19
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17630..18349)
DNA (720bp) protein (240aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
pyruvate formate-lyase activating enzyme (EC:1.97.1.4); K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4]
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WW31_9PORP
scnpilot_expt_750_p_scaffold_387_curated_20
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18433..20664)
DNA (2232bp) protein (744aa)
formate acetyltransferase (EC:2.3.1.54); K00656 formate C-acetyltransferase [EC:2.3.1.54]
Formate acetyltransferase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WW32_9PORP
Formate acetyltransferase {ECO:0000313|EMBL:EGK06647.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_387_curated_21
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21542..22384
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WW33_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06648.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_387_curated_22
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22387..22893
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WW34_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06649.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_387_curated_23
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22924..24654
DNA (1731bp) protein (577aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WW35_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06650.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_387_curated_24
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24741..26171)
DNA (1431bp) protein (477aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WW36_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06651.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
modulator of DNA gyrase; K03568 TldD protein rbh
scnpilot_expt_750_p_scaffold_387_curated_25
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26173..27543)
DNA (1371bp) protein (457aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WW37_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06652.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
mate efflux family protein
scnpilot_expt_750_p_scaffold_387_curated_26
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27684..28457)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WW38_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06653.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
scnpilot_expt_750_p_scaffold_387_curated_27
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28696..30423
DNA (1728bp) protein (576aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Lysine--tRNA ligase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WW39_9PORP
scnpilot_expt_750_p_scaffold_387_curated_28
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30454..31452
DNA (999bp) protein (333aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
glycerol-3-phosphate dehydrogenase; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WW40_9PORP
scnpilot_expt_750_p_scaffold_387_curated_29
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31462..32808
DNA (1347bp) protein (449aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
Glucose-6-phosphate isomerase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WW41_9PORP
scnpilot_expt_750_p_scaffold_387_curated_30
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32906..33931
DNA (1026bp) protein (342aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}
ribosomal RNA large subunit methyltransferase N; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
Probable dual-specificity RNA methyltransferase RlmN n=2 Tax=Dysgonomonas RepID=F8WW42_9PORP
Displaying items 1-30 of 76 in total

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